RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PTCHD1Q96NR3 888 aa7.6□□□□□ -1.19
SSR3-208ENST00000496050 PHF20Q9BVI0 1012 aa7.6□□□□□ -1.19
SSR3-208ENST00000496050 TARS2Q9BW92 718 aaKnown RBP7.6□□□□□ -1.19
SSR3-208ENST00000496050 ATP13A1Q9HD20 1204 aa7.6□□□□□ -1.19
SSR3-208ENST00000496050 AP5S1Q9NUS5 200 aa7.6□□□□□ -1.19
SSR3-208ENST00000496050 PCDHA9Q9Y5H5 950 aa7.6□□□□□ -1.19
SSR3-208ENST00000496050 PCDHA11Q9Y5I1 949 aa7.6□□□□□ -1.19
SSR3-208ENST00000496050 TNPO3Q9Y5L0 923 aaKnown RBP7.6□□□□□ -1.19
SSR3-208ENST00000496050 TCRBV16S1A1N1A0A5B0 115 aa7.59□□□□□ -1.19
SSR3-208ENST00000496050 FGF10O15520 208 aaPredicted RBP7.59□□□□□ -1.19
SSR3-208ENST00000496050 NPTXRO95502 500 aa7.59□□□□□ -1.19
SSR3-208ENST00000496050 POU3F2P20265 443 aaPredicted RBP7.59□□□□□ -1.19
SSR3-208ENST00000496050 RPL10P27635 214 aaKnown RBP7.59□□□□□ -1.19
SSR3-208ENST00000496050 AOC3Q16853 763 aa7.59□□□□□ -1.19
SSR3-208ENST00000496050 UBR7Q8N806 425 aa7.59□□□□□ -1.19
SSR3-208ENST00000496050 NAT16Q8N8M0 369 aa7.59□□□□□ -1.19
SSR3-208ENST00000496050 MISP3Q96FF7 219 aa7.59□□□□□ -1.19
SSR3-208ENST00000496050 TMEFF2Q9UIK5 374 aaPredicted RBP7.59□□□□□ -1.19
SSR3-208ENST00000496050 ATP8A1Q9Y2Q0 1164 aa7.59□□□□□ -1.19
SSR3-208ENST00000496050 ASXL2Q76L83 1435 aa7.59□□□□□ -1.19
SSR3-208ENST00000496050 ARNTLO00327 626 aa7.58□□□□□ -1.2
SSR3-208ENST00000496050 ESR1P03372 595 aa7.58□□□□□ -1.2
SSR3-208ENST00000496050 RBM10P98175 930 aaKnown RBP7.58□□□□□ -1.2
SSR3-208ENST00000496050 CFAP100Q494V2 611 aa7.58□□□□□ -1.2
SSR3-208ENST00000496050 HLA-DQA1Q5Y7H0 255 aa7.58□□□□□ -1.2
SSR3-208ENST00000496050 WAPLQ7Z5K2 1190 aa7.58□□□□□ -1.2
SSR3-208ENST00000496050 RNF180Q86T96 592 aa7.58□□□□□ -1.2
SSR3-208ENST00000496050 MTDHQ86UE4 582 aaKnown RBP7.58□□□□□ -1.2
SSR3-208ENST00000496050 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.58□□□□□ -1.24e-40■□□□□ 8.4
SSR3-208ENST00000496050 LEO1Q8WVC0 666 aaPredicted RBP7.58□□□□□ -1.2
SSR3-208ENST00000496050 ALG1Q9BT22 464 aa7.58□□□□□ -1.2
SSR3-208ENST00000496050 DYRK3O43781 588 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 MYO1BO43795 1136 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 JMJD7P0C870 316 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 GRIK1P39086 918 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 TEKQ02763 1124 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 WWC2Q6AWC2 1192 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 CYP2R1Q6VVX0 501 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 LBX2Q6XYB7 198 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 DDX53Q86TM3 631 aaKnown RBP7.57□□□□□ -1.2
SSR3-208ENST00000496050 WNK4Q96J92 1243 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 SPOCK3Q9BQ16 436 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 MCM8Q9UJA3 840 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 PCDHA8Q9Y5H6 950 aa7.57□□□□□ -1.2
SSR3-208ENST00000496050 RASGRP1O95267 797 aa7.56□□□□□ -1.2
SSR3-208ENST00000496050 PAK1Q13153 545 aa7.56□□□□□ -1.2
SSR3-208ENST00000496050 CDCA2Q69YH5 1023 aaPredicted RBP7.56□□□□□ -1.2
SSR3-208ENST00000496050 INTS5Q6P9B9 1019 aaKnown RBP7.56□□□□□ -1.2
SSR3-208ENST00000496050 CPNE8Q86YQ8 564 aa7.56□□□□□ -1.2
SSR3-208ENST00000496050 CCDC103Q8IW40 242 aa7.56□□□□□ -1.2
SSR3-208ENST00000496050 ZC3H7AQ8IWR0 971 aaKnown RBP7.56□□□□□ -1.2
SSR3-208ENST00000496050 STK11IPQ8N1F8 1099 aa7.56□□□□□ -1.2
SSR3-208ENST00000496050 RCBTB1Q8NDN9 531 aa7.56□□□□□ -1.2
SSR3-208ENST00000496050 LMCD1Q9NZU5 365 aa7.56□□□□□ -1.2
SSR3-208ENST00000496050 TMEM82A0PJX8 343 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 GSTA4O15217 222 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 RAB11FIP3O75154 756 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 PROCP04070 461 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 GTF2A2P52657 109 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 LAPTM5Q13571 262 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 PCBP1Q15365 356 aaKnown RBP eCLIP7.55□□□□□ -1.2
SSR3-208ENST00000496050 KIZQ2M2Z5 673 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 DDX42Q86XP3 938 aaKnown RBP eCLIP7.55□□□□□ -1.2
SSR3-208ENST00000496050 ATL2Q8NHH9 583 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 MTFR1LQ9H019 292 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 BSDC1Q9NW68 430 aaPredicted RBP7.55□□□□□ -1.2
SSR3-208ENST00000496050 TNFRSF10DQ9UBN6 386 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 ZNF281Q9Y2X9 895 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 PCDHA2Q9Y5H9 948 aa7.55□□□□□ -1.2
SSR3-208ENST00000496050 TIMM13Q9Y5L4 95 aaPredicted RBP7.55□□□□□ -1.2
SSR3-208ENST00000496050 NPHS1O60500 1241 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 MSCO60682 206 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 IGHA1P01876 353 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 LCP1P13796 627 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 HOXA10P31260 410 aaPredicted RBP7.54□□□□□ -1.2
SSR3-208ENST00000496050 IKZF1Q13422 519 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 LSAMPQ13449 338 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 ZNF460Q14592 562 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 INF2Q27J81 1249 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 ZCCHC8Q6NZY4 707 aaKnown RBP7.54□□□□□ -1.2
SSR3-208ENST00000496050 ZPBP2Q6X784 338 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 ANKLE2Q86XL3 938 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 KIF18BQ86Y91 864 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 JAMLQ86YT9 394 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 RPUSD2Q8IZ73 545 aaKnown RBP7.54□□□□□ -1.2
SSR3-208ENST00000496050 PRPF38AQ8NAV1 312 aaKnown RBP7.54□□□□□ -1.2
SSR3-208ENST00000496050 TMEM52Q8NDY8 209 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 CHAMP1Q96JM3 812 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 FCRL2Q96LA5 508 aaPredicted RBP7.54□□□□□ -1.2
SSR3-208ENST00000496050 METTL14Q9HCE5 456 aaKnown RBP7.54□□□□□ -1.2
SSR3-208ENST00000496050 HOMER2Q9NSB8 354 aa7.54□□□□□ -1.2
SSR3-208ENST00000496050 DDX56Q9NY93 547 aaKnown RBP7.54□□□□□ -1.2
SSR3-208ENST00000496050 ALG1L2C9J202 215 aa7.53□□□□□ -1.2
SSR3-208ENST00000496050 ARVCFO00192 962 aa7.53□□□□□ -1.2
SSR3-208ENST00000496050 KPNA6O60684 536 aa7.53□□□□□ -1.2
SSR3-208ENST00000496050 TGFB1P01137 390 aa7.53□□□□□ -1.2
SSR3-208ENST00000496050 KCNA6P17658 529 aa7.53□□□□□ -1.2
SSR3-208ENST00000496050 SCNN1BP51168 640 aa7.53□□□□□ -1.2
SSR3-208ENST00000496050 RPL11P62913 178 aaKnown RBP7.53□□□□□ -1.2
SSR3-208ENST00000496050 PIK3R6Q5UE93 754 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms