RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 GCLCP48506 637 aaPredicted RBP13.03□□□□□ -0.32
MCF2L-231ENST00000494043 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
MCF2L-231ENST00000494043 TOB1P50616 345 aaPredicted RBP13.03□□□□□ -0.32
MCF2L-231ENST00000494043 HSD17B4P51659 736 aa13.03□□□□□ -0.32
MCF2L-231ENST00000494043 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
MCF2L-231ENST00000494043 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
MCF2L-231ENST00000494043 SAMD3Q8N6K7 520 aa13.03□□□□□ -0.32
MCF2L-231ENST00000494043 ANO3Q9BYT9 981 aa13.03□□□□□ -0.32
MCF2L-231ENST00000494043 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
MCF2L-231ENST00000494043 TXNRD2Q9NNW7 524 aa13.03□□□□□ -0.32
MCF2L-231ENST00000494043 CFAP45Q9UL16 551 aa13.03□□□□□ -0.32
MCF2L-231ENST00000494043 SMCHD1A6NHR9 2005 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 FIBPO43427 364 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 PEX10O60683 326 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 FOSP01100 380 aaPredicted RBP13.02□□□□□ -0.33
MCF2L-231ENST00000494043 COPB2P35606 906 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 NOGQ13253 232 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 GRM1Q13255 1194 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 INF2Q27J81 1249 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 CHST13Q8NET6 341 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 TBC1D5Q92609 795 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 PGBD1Q96JS3 809 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 CAPNS2Q96L46 248 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 MOV10L1Q9BXT6 1211 aaKnown RBP13.02□□□□□ -0.33
MCF2L-231ENST00000494043 SCAND2PQ9GZW5 306 aaPredicted RBP13.02□□□□□ -0.33
MCF2L-231ENST00000494043 ACAD9Q9H845 621 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.33
MCF2L-231ENST00000494043 RTEL1Q9NZ71 1219 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 TFIP11Q9UBB9 837 aaKnown RBP13.02□□□□□ -0.33
MCF2L-231ENST00000494043 CLIC4Q9Y696 253 aa13.02□□□□□ -0.33
MCF2L-231ENST00000494043 SPDYE3A6NKU9 549 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 WNT7AO00755 349 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 YEATS4O95619 227 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 SLC25A27O95847 323 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 TM4SF4P48230 202 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 NASPP49321 788 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-231ENST00000494043 ERVK-9P63128 1117 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 ERVK-24P63145 666 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
MCF2L-231ENST00000494043 NBR1Q14596 966 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 TTC38Q5R3I4 469 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 ANO1Q5XXA6 986 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 NEK8Q86SG6 692 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 TMEM87AQ8NBN3 555 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 TBCKQ8TEA7 893 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 ZIC5Q96T25 663 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 MAF1Q9H063 256 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 FBXO40Q9UH90 709 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 ADGRA2Q96PE1 1338 aa13.01□□□□□ -0.33
MCF2L-231ENST00000494043 GOLGA6L22H0YM25 854 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 ATP2B1P20020 1258 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 MCM4P33991 863 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 SREBF1P36956 1147 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 RPS6P62753 249 aaKnown RBP13□□□□□ -0.33
MCF2L-231ENST00000494043 CCNA1P78396 465 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 SF3A1Q15459 793 aaKnown RBP13□□□□□ -0.33
MCF2L-231ENST00000494043 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
MCF2L-231ENST00000494043 CSPP1Q1MSJ5 1256 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 Q3C1V9 767 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 NSMFQ6X4W1 530 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 SLC30A10Q6XR72 485 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 RNF207Q6ZRF8 634 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13□□□□□ -0.33
MCF2L-231ENST00000494043 FCHSD1Q86WN1 690 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 SHCBP1Q8NEM2 672 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 GPRC5AQ8NFJ5 357 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 SYTL5Q8TDW5 730 aaPredicted RBP13□□□□□ -0.33
MCF2L-231ENST00000494043 LEO1Q8WVC0 666 aaPredicted RBP13□□□□□ -0.33
MCF2L-231ENST00000494043 SPATA32Q96LK8 384 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 EHMT1Q9H9B1 1298 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 GDPD2Q9HCC8 539 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 A1CFQ9NQ94 594 aaKnown RBP13□□□□□ -0.33
MCF2L-231ENST00000494043 EIF4ENIF1Q9NRA8 985 aaKnown RBP13□□□□□ -0.33
MCF2L-231ENST00000494043 PCDHB6Q9Y5E3 794 aa13□□□□□ -0.33
MCF2L-231ENST00000494043 PFASO15067 1338 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 ELP1O95163 1332 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 DDX11L8A8MPP1 907 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 AOC2O75106 756 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 ERCC3P19447 782 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 BAATQ14032 418 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-231ENST00000494043 STK38Q15208 465 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 PTPAQ15257 358 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 FAM110CQ1W6H9 321 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-231ENST00000494043 ANKRD13CQ8N6S4 541 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 LINC00301Q8NCQ3 95 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 CRYGNQ8WXF5 182 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 MROH8Q9H579 483 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 CYP39A1Q9NYL5 469 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 COL20A1Q9P218 1284 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
MCF2L-231ENST00000494043 FRMPD4Q14CM0 1322 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 RPTORQ8N122 1335 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 EDIL3O43854 480 aa12.98□□□□□ -0.33
MCF2L-231ENST00000494043 BMP15O95972 392 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms