RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PGBD1Q96JS3 809 aa11.5□□□□□ -0.57
PRPF3-206ENST00000493553 PYM1Q9BRP8 204 aaKnown RBP11.5□□□□□ -0.57
PRPF3-206ENST00000493553 PANK2Q9BZ23 570 aa11.5□□□□□ -0.57
PRPF3-206ENST00000493553 VPS33BQ9H267 617 aa11.5□□□□□ -0.57
PRPF3-206ENST00000493553 ANO10Q9NW15 660 aa11.5□□□□□ -0.57
PRPF3-206ENST00000493553 CCDC39Q9UFE4 941 aa11.5□□□□□ -0.57
PRPF3-206ENST00000493553 SWAP70Q9UH65 585 aa11.5□□□□□ -0.57
PRPF3-206ENST00000493553 MYO5AQ9Y4I1 1855 aaKnown RBP11.5□□□□□ -0.57
PRPF3-206ENST00000493553 TCHHQ07283 1943 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 LIG1P18858 919 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 SMTNP53814 917 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 TFAP4Q01664 338 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 TYRO3Q06418 890 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 STX1AQ16623 288 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 STRIP1Q5VSL9 837 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 KANK3Q6NY19 840 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 FOXR1Q6PIV2 292 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 C16orf86Q6ZW13 317 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 NBPF11Q86T75 865 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
PRPF3-206ENST00000493553 CCDC148Q8NFR7 591 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 NEDD1Q8NHV4 660 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 CCDC12Q8WUD4 166 aaPredicted RBP11.49□□□□□ -0.57
PRPF3-206ENST00000493553 TEKT1Q969V4 418 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 SDF4Q9BRK5 362 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 ZKSCAN3Q9BRR0 538 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 FUCA2Q9BTY2 467 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 INCENPQ9NQS7 918 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 PCDHA7Q9UN72 937 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 TACC3Q9Y6A5 838 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 LRRC37AA6NMS7 1700 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 CASZ1Q86V15 1759 aa11.49□□□□□ -0.57
PRPF3-206ENST00000493553 CHD4Q14839 1912 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 FAM237AA0A1B0GTK4 181 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 GOLGA6L6A8MZA4 724 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 hCG_1984214I3L0E3 225 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 ATP9BO43861 1147 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 HLA-DOAP06340 250 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 KRT2P35908 639 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 PHKA2P46019 1235 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 BAG6P46379 1132 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 CEBPZQ03701 1054 aaKnown RBP11.48□□□□□ -0.57
PRPF3-206ENST00000493553 DHX8Q14562 1220 aaKnown RBP11.48□□□□□ -0.57
PRPF3-206ENST00000493553 SOGA3Q5TF21 947 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 CCDC144CPQ8IYA2 1237 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 DEPDC4Q8N2C3 294 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 ZNF713Q8N859 430 aaPredicted RBP11.48□□□□□ -0.57
PRPF3-206ENST00000493553 TGFBRAP1Q8WUH2 860 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 ZNF622Q969S3 477 aaKnown RBP eCLIP11.48□□□□□ -0.573e-6■■□□□ 13.1
PRPF3-206ENST00000493553 FAM13BQ9NYF5 915 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 USP25Q9UHP3 1055 aa11.48□□□□□ -0.57
PRPF3-206ENST00000493553 TAF1P21675 1872 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 TRIM75PA6NK02 468 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 PRDM1O75626 825 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 TOP1P11387 765 aaKnown RBP11.47□□□□□ -0.57
PRPF3-206ENST00000493553 RXRAP19793 462 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 MMP14P50281 582 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 GAS6Q14393 721 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 OTUD7BQ6GQQ9 843 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 TRIM50Q86XT4 487 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 RAB11FIP4Q86YS3 637 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 CEP57L1Q8IYX8 460 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 ENGASEQ8NFI3 743 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 GLMNQ92990 594 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 FERMT2Q96AC1 680 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 CCDC17Q96LX7 622 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 CAMKK2Q96RR4 588 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 DHX36Q9H2U1 1008 aaKnown RBP11.47□□□□□ -0.57
PRPF3-206ENST00000493553 DAGLAQ9Y4D2 1042 aa11.47□□□□□ -0.57
PRPF3-206ENST00000493553 FLT1P17948 1338 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 CYP2D7A0A087X1C5 515 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 SCG2P13521 617 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 CDK8P49336 464 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 RHBDL3P58872 404 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 TPM4P67936 248 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 GRM4Q14833 912 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 MTFR1Q15390 333 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 PFKFB3Q16875 520 aaPredicted RBP11.46□□□□□ -0.57
PRPF3-206ENST00000493553 ZSCAN30Q86W11 494 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 MAPKAPK5Q8IW41 473 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 FMR1NBQ8N0W7 255 aaPredicted RBP11.46□□□□□ -0.57
PRPF3-206ENST00000493553 RNF214Q8ND24 703 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 PHF20Q9BVI0 1012 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 NUCKS1Q9H1E3 243 aaKnown RBP11.46□□□□□ -0.57
PRPF3-206ENST00000493553 EHD4Q9H223 541 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 SERTAD1Q9UHV2 236 aa11.46□□□□□ -0.57
PRPF3-206ENST00000493553 TTF2Q9UNY4 1162 aaKnown RBP11.46□□□□□ -0.57
PRPF3-206ENST00000493553 C10orf71Q711Q0 1435 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 KIF28PB7ZC32 967 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 GOLGA6L19H0YKK7 550 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 MYO1BO43795 1136 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 PTMAP06454 111 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms