RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 USH1GQ495M9 461 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 BRDTQ58F21 947 aaPredicted RBP15.66■□□□□ 0.1
SNED1-212ENST00000493358 TTC22Q5TAA0 569 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 SLC30A10Q6XR72 485 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 SEZ6LQ9BYH1 1024 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 MTMR10Q9NXD2 777 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 GNEQ9Y223 722 aaKnown RBP15.66■□□□□ 0.1
SNED1-212ENST00000493358 Q9Y3F1 56 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 COL6A3P12111 3177 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 ASTN1O14525 1302 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 TNKSO95271 1327 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 SCN10AQ9Y5Y9 1956 aa15.66■□□□□ 0.1
SNED1-212ENST00000493358 PARP1P09874 1014 aaKnown RBP15.65■□□□□ 0.1
SNED1-212ENST00000493358 NKX3-2P78367 333 aa15.65■□□□□ 0.1
SNED1-212ENST00000493358 IRX5P78411 483 aaPredicted RBP15.65■□□□□ 0.1
SNED1-212ENST00000493358 PPIGQ13427 754 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNED1-212ENST00000493358 CDC37Q16543 378 aaPredicted RBP15.65■□□□□ 0.1
SNED1-212ENST00000493358 IFIT1BQ5T764 474 aaKnown RBP15.65■□□□□ 0.1
SNED1-212ENST00000493358 CXCL17Q6UXB2 119 aa15.65■□□□□ 0.1
SNED1-212ENST00000493358 TMEM199Q8N511 208 aa15.65■□□□□ 0.1
SNED1-212ENST00000493358 DNERQ8NFT8 737 aa15.65■□□□□ 0.1
SNED1-212ENST00000493358 MORC4Q8TE76 937 aa15.65■□□□□ 0.1
SNED1-212ENST00000493358 PDGFCQ9NRA1 345 aa15.65■□□□□ 0.1
SNED1-212ENST00000493358 TBX21Q9UL17 535 aa15.65■□□□□ 0.1
SNED1-212ENST00000493358 TRIP12Q14669 1992 aaPredicted RBP15.65■□□□□ 0.1
SNED1-212ENST00000493358 ABCB11O95342 1321 aa15.65■□□□□ 0.1
SNED1-212ENST00000493358 ITGB8P26012 769 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 CPT1AP50416 773 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 CDK7P50613 346 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
SNED1-212ENST00000493358 SMAD3P84022 425 aaKnown RBP15.64■□□□□ 0.09
SNED1-212ENST00000493358 PPP2R5BQ15173 497 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 DUSP28Q4G0W2 176 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 MFSD5Q6N075 450 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 TAPT1Q6NXT6 567 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 ENAHQ8N8S7 591 aaPredicted RBP15.64■□□□□ 0.09
SNED1-212ENST00000493358 PURBQ96QR8 312 aaKnown RBP15.64■□□□□ 0.09
SNED1-212ENST00000493358 WDR11Q9BZH6 1224 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 UBA5Q9GZZ9 404 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 MAF1Q9H063 256 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 GPHNQ9NQX3 736 aaPredicted RBP15.64■□□□□ 0.09
SNED1-212ENST00000493358 POLR3EQ9NVU0 708 aa15.64■□□□□ 0.09
SNED1-212ENST00000493358 DDX49Q9Y6V7 483 aaKnown RBP15.64■□□□□ 0.09
SNED1-212ENST00000493358 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.09
SNED1-212ENST00000493358 CTAGE5O15320 804 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 ITGA7Q13683 1181 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 MCF2L2Q86YR7 1114 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 FAM126BQ8IXS8 530 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 OR6J1Q8NGC5 347 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 SCFD2Q8WU76 684 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 CLEC4DQ8WXI8 215 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 ANKS1AQ92625 1134 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 FAM161BQ96MY7 647 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 PPP1R12CQ9BZL4 782 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 ZSWIM5Q9P217 1185 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
SNED1-212ENST00000493358 TANC1Q9C0D5 1861 aa15.63■□□□□ 0.09
SNED1-212ENST00000493358 ERICH2A1L162 156 aa15.62■□□□□ 0.09
SNED1-212ENST00000493358 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
SNED1-212ENST00000493358 SART3Q15020 963 aaKnown RBP15.62■□□□□ 0.09
SNED1-212ENST00000493358 PSRC1Q6PGN9 363 aaPredicted RBP15.62■□□□□ 0.09
SNED1-212ENST00000493358 RALYLQ86SE5 291 aaKnown RBP15.62■□□□□ 0.09
SNED1-212ENST00000493358 MTIF3Q9H2K0 278 aaKnown RBP15.62■□□□□ 0.09
SNED1-212ENST00000493358 CPVLQ9H3G5 476 aa15.62■□□□□ 0.09
SNED1-212ENST00000493358 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
SNED1-212ENST00000493358 SCN5AQ14524 2016 aa15.61■□□□□ 0.09
SNED1-212ENST00000493358 MYL3P08590 195 aa15.61■□□□□ 0.09
SNED1-212ENST00000493358 GSPT1P15170 499 aaKnown RBP15.61■□□□□ 0.09
SNED1-212ENST00000493358 PDE4AP27815 886 aa15.61■□□□□ 0.09
SNED1-212ENST00000493358 TTLL4Q14679 1199 aa15.61■□□□□ 0.09
SNED1-212ENST00000493358 FBXO11Q86XK2 927 aa15.61■□□□□ 0.09
SNED1-212ENST00000493358 ADGRF4Q8IZF3 695 aa15.61■□□□□ 0.09
SNED1-212ENST00000493358 RGS22Q8NE09 1264 aa15.61■□□□□ 0.09
SNED1-212ENST00000493358 HIPK3Q9H422 1215 aa15.61■□□□□ 0.09
SNED1-212ENST00000493358 TMEM265A0A087WTH1 108 aa15.6■□□□□ 0.09
SNED1-212ENST00000493358 RBM47A0AV96 593 aaKnown RBP15.6■□□□□ 0.09
SNED1-212ENST00000493358 CD4P01730 458 aa15.6■□□□□ 0.09
SNED1-212ENST00000493358 EPHB4P54760 987 aa15.6■□□□□ 0.09
SNED1-212ENST00000493358 TRAF1Q13077 416 aa15.6■□□□□ 0.09
SNED1-212ENST00000493358 QRICH1Q2TAL8 776 aa15.6■□□□□ 0.09
SNED1-212ENST00000493358 GUCD1Q96NT3 240 aa15.6■□□□□ 0.09
SNED1-212ENST00000493358 VAT1LQ9HCJ6 419 aa15.6■□□□□ 0.09
SNED1-212ENST00000493358 KAT6AQ92794 2004 aa15.6■□□□□ 0.09
SNED1-212ENST00000493358 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.59■□□□□ 0.09
SNED1-212ENST00000493358 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.59■□□□□ 0.09
SNED1-212ENST00000493358 KPNA6O60684 536 aa15.59■□□□□ 0.09
SNED1-212ENST00000493358 TXNP10599 105 aaKnown RBP15.59■□□□□ 0.09
SNED1-212ENST00000493358 CSF2RAP15509 400 aa15.59■□□□□ 0.09
SNED1-212ENST00000493358 PTGS1P23219 599 aa15.59■□□□□ 0.09
SNED1-212ENST00000493358 EDNRBP24530 442 aa15.59■□□□□ 0.09
SNED1-212ENST00000493358 PSMC6P62333 389 aa15.59■□□□□ 0.09
SNED1-212ENST00000493358 SLC43A3Q8NBI5 491 aa15.59■□□□□ 0.09
SNED1-212ENST00000493358 NSUN6Q8TEA1 469 aaKnown RBP15.59■□□□□ 0.09
SNED1-212ENST00000493358 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.09
SNED1-212ENST00000493358 MTG1Q9BT17 334 aaPredicted RBP15.59■□□□□ 0.09
SNED1-212ENST00000493358 AMNQ9BXJ7 453 aa15.59■□□□□ 0.09
SNED1-212ENST00000493358 KLRF2D3W0D1 207 aa15.58■□□□□ 0.08
SNED1-212ENST00000493358 IFIT3O14879 490 aaKnown RBP15.58■□□□□ 0.08
SNED1-212ENST00000493358 SUPT20HL2P0C7V6 817 aa15.58■□□□□ 0.08
SNED1-212ENST00000493358 CHMLP26374 656 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms