RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 PDGFCQ9NRA1 345 aa13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 COG5Q9UP83 839 aa13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 TNKSO95271 1327 aa13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 BDP1A6H8Y1 2624 aa13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 RBM47A0AV96 593 aaKnown RBP13□□□□□ -0.33
SNRNP200-207ENST00000493271 B4DLN1 442 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 KIF28PB7ZC32 967 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 BMP1P13497 986 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 PLA2G5P39877 138 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 NOVP48745 357 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 ALDH5A1P51649 535 aaPredicted RBP13□□□□□ -0.33
SNRNP200-207ENST00000493271 MRPL12P52815 198 aaKnown RBP13□□□□□ -0.33
SNRNP200-207ENST00000493271 PSMC6P62333 389 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 PURAQ00577 322 aaKnown RBP13□□□□□ -0.33
SNRNP200-207ENST00000493271 MUM1L1Q5H9M0 696 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 KCTD1Q719H9 257 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 EEPD1Q7L9B9 569 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 MAF1Q9H063 256 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 RANBP17Q9H2T7 1088 aaKnown RBP13□□□□□ -0.33
SNRNP200-207ENST00000493271 RCAN3Q9UKA8 241 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13□□□□□ -0.33
SNRNP200-207ENST00000493271 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
SNRNP200-207ENST00000493271 NCOR1O75376 2440 aa13□□□□□ -0.33
SNRNP200-207ENST00000493271 TRANK1O15050 2925 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 RABGGTBP53611 331 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 BFSP2Q13515 415 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 ZMYM1Q5SVZ6 1142 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 BTNL9Q6UXG8 535 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 RETREG2Q8NC44 543 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 SCLYQ96I15 445 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 FSD1Q9BTV5 496 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 ANAPC4Q9UJX5 808 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 GBF1Q92538 1859 aa12.99□□□□□ -0.33
SNRNP200-207ENST00000493271 XIRP2A4UGR9 3374 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 ORC4O43929 436 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 BAIAP3O94812 1187 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 CA3P07451 260 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 BAATQ14032 418 aaPredicted RBP12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 TICAM2Q86XR7 235 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 DNERQ8NFT8 737 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 OR6J1Q8NGC5 347 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 VWCEQ96DN2 955 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 FAM122AQ96E09 287 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 IL17RBQ9NRM6 502 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 MTCH2Q9Y6C9 303 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 MYO9BQ13459 2157 aa12.98□□□□□ -0.33
SNRNP200-207ENST00000493271 A6NJR5 290 aa12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 RANBP6O60518 1105 aaKnown RBP12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 PARNO95453 639 aaKnown RBP12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 CYP2C9P11712 490 aa12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 CCDC155Q8N6L0 562 aa12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 SEC62Q99442 399 aaKnown RBP12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 TRMT13Q9NUP7 481 aaKnown RBP12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 LMCD1Q9NZU5 365 aa12.97□□□□□ -0.33
SNRNP200-207ENST00000493271 WDR19Q8NEZ3 1342 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 PTPDC1A2A3K4 754 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 MYL3P08590 195 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 FGRP09769 529 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 IQCF3P0C7M6 154 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 TOP1P11387 765 aaKnown RBP12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 PCP11498 1178 aaKnown RBP12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 MYOGP15173 224 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 EDNRBP24530 442 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 NT5C2P49902 561 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 PDE4DQ08499 809 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 FAM47CQ5HY64 1035 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 SYDE2Q5VT97 1194 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 TSHZ3Q63HK5 1081 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 RNF207Q6ZRF8 634 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 DEFB128Q7Z7B8 93 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 CAGE1Q8TC20 777 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 PI4K2BQ8TCG2 481 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 TCP11L1Q9NUJ3 509 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 NOD1Q9Y239 953 aa12.96□□□□□ -0.33
SNRNP200-207ENST00000493271 SCN10AQ9Y5Y9 1956 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 NFIBO00712 420 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 SNAP25P60880 206 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 ALX1Q15699 326 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 NBPF20Q3BBV1 942 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 TMEM63BQ5T3F8 832 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 HERC6Q8IVU3 1022 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 MIER1Q8N108 512 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 AFAP1L1Q8TED9 768 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 TTC14Q96N46 770 aa12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNRNP200-207ENST00000493271 LCTP09848 1927 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 TANC1Q9C0D5 1861 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 NMT2O60551 498 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 EFCAB14O75071 495 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 PTGS1P23219 599 aa12.94□□□□□ -0.34
SNRNP200-207ENST00000493271 KCNJ6P48051 423 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms