RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 CFHR5Q9BXR6 569 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 PSTPIP2Q9H939 334 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 EFCC1Q9HA90 598 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 ZFYVE28Q9HCC9 887 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 RIC8AQ9NPQ8 531 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 RNF146Q9NTX7 359 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 ALDH1A1P00352 501 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 CTGFP29279 349 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 CLK2P49760 499 aaKnown RBP10.76□□□□□ -0.69
CSTF1-206ENST00000493039 NLRP5P59047 1200 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 GHRHRQ02643 423 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 KCTD17Q8N5Z5 321 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 PURBQ96QR8 312 aaKnown RBP10.76□□□□□ -0.69
CSTF1-206ENST00000493039 COL20A1Q9P218 1284 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 MRPL11Q9Y3B7 192 aaKnown RBP10.76□□□□□ -0.69
CSTF1-206ENST00000493039 THSD7BQ9C0I4 1608 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 ABCB11O95342 1321 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 EDIL3O43854 480 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 BRD1O95696 1058 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 PDCP20941 246 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 HOXA13P31271 388 aaPredicted RBP10.75□□□□□ -0.69
CSTF1-206ENST00000493039 UBE2SQ16763 222 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 PPP1R18Q6NYC8 613 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 DIS3L2Q8IYB7 885 aaKnown RBP10.75□□□□□ -0.69
CSTF1-206ENST00000493039 DAGLBQ8NCG7 672 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 TMEM260Q9NX78 707 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 PCDHA4Q9UN74 947 aa10.75□□□□□ -0.69
CSTF1-206ENST00000493039 CTDP1Q9Y5B0 961 aaPredicted RBP10.75□□□□□ -0.69
CSTF1-206ENST00000493039 FAM205CA6NFA0 338 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 PIK3CDO00329 1044 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 U2AF2P26368 475 aaKnown RBP eCLIP10.74□□□□□ -0.694e-14■□□□□ 8
CSTF1-206ENST00000493039 HSD17B4P51659 736 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 RPS6P62753 249 aaKnown RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 NCAPG2Q86XI2 1143 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 BLIDQ8IZY5 108 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 A1CFQ9NQ94 594 aaKnown RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 BIN2Q9UBW5 565 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 PCDHA6Q9UN73 950 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 KIF3AQ9Y496 699 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 PCDHA8Q9Y5H6 950 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 MYH6P13533 1939 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 VPS37CA5D8V6 355 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 SLC25A27O95847 323 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 CFBP00751 764 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 ADCY7P51828 1080 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 BAATQ14032 418 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 TKFCQ3LXA3 575 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 AXDND1Q5T1B0 1012 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 FOXD4L5Q5VV16 416 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 SLC30A10Q6XR72 485 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 SHCBP1Q8NEM2 672 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 CHST13Q8NET6 341 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 CCDC148Q8NFR7 591 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 CCDC12Q8WUD4 166 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 FOXD4L4Q8WXT5 416 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-206ENST00000493039 ACAD9Q9H845 621 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 CYP39A1Q9NYL5 469 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 PNMA2Q9UL42 364 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 ASTN1O14525 1302 aa10.74□□□□□ -0.69
CSTF1-206ENST00000493039 H3BQV1 296 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 ZSCAN22P10073 491 aaPredicted RBP10.73□□□□□ -0.69
CSTF1-206ENST00000493039 XBP1P17861 261 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
CSTF1-206ENST00000493039 TRAF1Q13077 416 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 RESTQ13127 1097 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 IFFO2Q5TF58 517 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 GALNT17Q6IS24 598 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 FAM173BQ6P4H8 233 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 SYTL5Q8TDW5 730 aaPredicted RBP10.73□□□□□ -0.69
CSTF1-206ENST00000493039 CUL5Q93034 780 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 CHAMP1Q96JM3 812 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 PGBD1Q96JS3 809 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 C6orf50Q9HD87 102 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 WBP1LQ9NX94 342 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 WNT7AO00755 349 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 ECM2O94769 699 aaPredicted RBP10.73□□□□□ -0.69
CSTF1-206ENST00000493039 CALML3P27482 149 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 GNA11P29992 359 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 TRIM29Q14134 588 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 JAKMIP3Q5VZ66 844 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 NSMFQ6X4W1 530 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 CRYGNQ8WXF5 182 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 ARHGAP39Q9C0H5 1083 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 FOXP1Q9H334 677 aaPredicted RBP10.73□□□□□ -0.69
CSTF1-206ENST00000493039 MROH8Q9H579 483 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 TMEM51Q9NW97 253 aa10.73□□□□□ -0.69
CSTF1-206ENST00000493039 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 GCOM1H8Y6P7 765 aaPredicted RBP10.72□□□□□ -0.69
CSTF1-206ENST00000493039 POLR2MP0CAP2 368 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 KRT2P35908 639 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 CCNA1P78396 465 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 CNTN2Q02246 1040 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 MCTP1Q6DN14 999 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 RNF207Q6ZRF8 634 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 GPR142Q7Z601 462 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 REXO1Q8N1G1 1221 aaKnown RBP10.72□□□□□ -0.69
CSTF1-206ENST00000493039 FGD4Q96M96 766 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 TAAR1Q96RJ0 339 aa10.72□□□□□ -0.69
CSTF1-206ENST00000493039 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms