RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PRR12Q9ULL5 1215 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 PHF20L1A8MW92 1017 aa15.86■□□□□ 0.13
PTPN7-216ENST00000492977 ZNF500O60304 480 aaPredicted RBP15.86■□□□□ 0.13
PTPN7-216ENST00000492977 EGFRP00533 1210 aa15.86■□□□□ 0.13
PTPN7-216ENST00000492977 CHRM1P11229 460 aaPredicted RBP15.86■□□□□ 0.13
PTPN7-216ENST00000492977 ERCC5P28715 1186 aaPredicted RBP15.86■□□□□ 0.13
PTPN7-216ENST00000492977 CDC25AP30304 524 aa15.86■□□□□ 0.13
PTPN7-216ENST00000492977 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTPN7-216ENST00000492977 USP11P51784 963 aa15.86■□□□□ 0.13
PTPN7-216ENST00000492977 PDIA5Q14554 519 aa15.86■□□□□ 0.13
PTPN7-216ENST00000492977 KARSQ15046 597 aaKnown RBP15.86■□□□□ 0.13
PTPN7-216ENST00000492977 TMEM266Q2M3C6 531 aa15.86■□□□□ 0.13
PTPN7-216ENST00000492977 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
PTPN7-216ENST00000492977 RAB34Q9BZG1 259 aa15.86■□□□□ 0.13
PTPN7-216ENST00000492977 FOSP01100 380 aaPredicted RBP15.85■□□□□ 0.13
PTPN7-216ENST00000492977 SEMA3FQ13275 785 aa15.85■□□□□ 0.13
PTPN7-216ENST00000492977 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
PTPN7-216ENST00000492977 KIAA1755Q5JYT7 1200 aa15.85■□□□□ 0.13
PTPN7-216ENST00000492977 SAMD7Q7Z3H4 446 aa15.85■□□□□ 0.13
PTPN7-216ENST00000492977 CABP7Q86V35 215 aa15.85■□□□□ 0.13
PTPN7-216ENST00000492977 FAM160B2Q86V87 743 aa15.85■□□□□ 0.13
PTPN7-216ENST00000492977 RASSF8Q8NHQ8 419 aa15.85■□□□□ 0.13
PTPN7-216ENST00000492977 ENOX1Q8TC92 643 aaKnown RBP15.85■□□□□ 0.13
PTPN7-216ENST00000492977 MYH7BA7E2Y1 1941 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 PP2D1A8MPX8 630 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L15C9J2P7 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L13C9JLJ4 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L11C9JVI0 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L18D6R9N7 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L22D6RA61 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L17D6RBQ6 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L19D6RCP7 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L20D6RJB6 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 H7C1D1 291 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 MEIS2O14770 477 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 SLC37A4O43826 429 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 TDP2O95551 362 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 TECP42680 631 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L24Q0WX57 530 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 NAALADL2Q58DX5 795 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 FAM83BQ5T0W9 1011 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 USP17L6PQ6QN14 398 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 MOXD1Q6UVY6 613 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 MTRQ99707 1265 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 HSD3B7Q9H2F3 369 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 KBTBD4Q9NVX7 518 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 RMND1Q9NWS8 449 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 DDX25Q9UHL0 483 aaKnown RBP15.84■□□□□ 0.13
PTPN7-216ENST00000492977 HACL1Q9UJ83 578 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 FEM1BQ9UK73 627 aa15.84■□□□□ 0.13
PTPN7-216ENST00000492977 CYP3A7-CYP3A51PA0A087WV96 503 aa15.83■□□□□ 0.13
PTPN7-216ENST00000492977 CTNND1O60716 968 aaKnown RBP15.83■□□□□ 0.13
PTPN7-216ENST00000492977 CYP3A7P24462 503 aa15.83■□□□□ 0.13
PTPN7-216ENST00000492977 TXKP42681 527 aa15.83■□□□□ 0.13
PTPN7-216ENST00000492977 TBC1D10BQ4KMP7 808 aaPredicted RBP15.83■□□□□ 0.13
PTPN7-216ENST00000492977 ANO3Q9BYT9 981 aa15.83■□□□□ 0.13
PTPN7-216ENST00000492977 SPON1Q9HCB6 807 aa15.83■□□□□ 0.13
PTPN7-216ENST00000492977 ZNF541Q9H0D2 1346 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 PIK3CDO00329 1044 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 LMOD1P29536 600 aaPredicted RBP15.83■□□□□ 0.12
PTPN7-216ENST00000492977 SNAP25P60880 206 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 CUL4BQ13620 913 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 USH1GQ495M9 461 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 CCDC186Q7Z3E2 898 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 STAMQ92783 540 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 HOOK2Q96ED9 719 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 CALML4Q96GE6 196 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 MBOAT7Q96N66 472 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 DEFB129Q9H1M3 183 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 RANBP17Q9H2T7 1088 aaKnown RBP15.83■□□□□ 0.12
PTPN7-216ENST00000492977 TTC12Q9H892 705 aaPredicted RBP15.83■□□□□ 0.12
PTPN7-216ENST00000492977 LRWD1Q9UFC0 647 aa15.83■□□□□ 0.12
PTPN7-216ENST00000492977 ATAD5Q96QE3 1844 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 CBFA2T2O43439 604 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 RPN1P04843 607 aaKnown RBP15.82■□□□□ 0.12
PTPN7-216ENST00000492977 PLCG1P19174 1290 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 CASP1P29466 404 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 FANCCQ00597 558 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 DCAF15Q66K64 600 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 CRYGNQ8WXF5 182 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 ZNF830Q96NB3 372 aaPredicted RBP15.82■□□□□ 0.12
PTPN7-216ENST00000492977 MMTAG2Q9BU76 263 aaKnown RBP15.82■□□□□ 0.12
PTPN7-216ENST00000492977 BLZF1Q9H2G9 400 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 FANCLQ9NW38 375 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 IFNKQ9P0W0 207 aa15.82■□□□□ 0.12
PTPN7-216ENST00000492977 DICER1Q9UPY3 1922 aaKnown RBP15.81■□□□□ 0.12
PTPN7-216ENST00000492977 SPDYE3A6NKU9 549 aa15.81■□□□□ 0.12
PTPN7-216ENST00000492977 PYGBP11216 843 aa15.81■□□□□ 0.12
PTPN7-216ENST00000492977 LMNB1P20700 586 aa15.81■□□□□ 0.12
PTPN7-216ENST00000492977 PTGS1P23219 599 aa15.81■□□□□ 0.12
PTPN7-216ENST00000492977 FMR1Q06787 632 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTPN7-216ENST00000492977 KCNB1Q14721 858 aa15.81■□□□□ 0.12
PTPN7-216ENST00000492977 APOBEC3FQ8IUX4 373 aaKnown RBP15.81■□□□□ 0.12
PTPN7-216ENST00000492977 LPAR1Q92633 364 aa15.81■□□□□ 0.12
PTPN7-216ENST00000492977 HAS1Q92839 578 aa15.81■□□□□ 0.12
PTPN7-216ENST00000492977 ZFP91Q96JP5 570 aaPredicted RBP15.81■□□□□ 0.12
PTPN7-216ENST00000492977 ZNF341Q9BYN7 854 aa15.81■□□□□ 0.12
PTPN7-216ENST00000492977 XPO4Q9C0E2 1151 aaKnown RBP15.81■□□□□ 0.12
PTPN7-216ENST00000492977 IMPACTQ9P2X3 320 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms