RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
GPNMB-213ENST00000492512 HOXD11P31277 338 aaPredicted RBP16.28■□□□□ 0.2
GPNMB-213ENST00000492512 SNAP25P60880 206 aa16.28■□□□□ 0.2
GPNMB-213ENST00000492512 TFAP4Q01664 338 aa16.28■□□□□ 0.2
GPNMB-213ENST00000492512 DUSP28Q4G0W2 176 aa16.28■□□□□ 0.2
GPNMB-213ENST00000492512 SLC9A7Q96T83 725 aa16.28■□□□□ 0.2
GPNMB-213ENST00000492512 LRFN3Q9BTN0 628 aa16.28■□□□□ 0.2
GPNMB-213ENST00000492512 CHMP4BQ9H444 224 aaKnown RBP16.28■□□□□ 0.2
GPNMB-213ENST00000492512 EPHX3Q9H6B9 360 aa16.28■□□□□ 0.2
GPNMB-213ENST00000492512 TET1Q8NFU7 2136 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
GPNMB-213ENST00000492512 M0R2C6 588 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 PLA2G6O60733 806 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 SLC3A2P08195 630 aaKnown RBP16.27■□□□□ 0.2
GPNMB-213ENST00000492512 MYL3P08590 195 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 CPT1AP50416 773 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 PURAQ00577 322 aaKnown RBP16.27■□□□□ 0.2
GPNMB-213ENST00000492512 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 KRT40Q6A162 431 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 KCTD1Q719H9 257 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 IFNL3Q8IZI9 196 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 ARNTL2Q8WYA1 636 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 GPATCH3Q96I76 525 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 WDR11Q9BZH6 1224 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 NACAP1Q9BZK3 213 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.2
GPNMB-213ENST00000492512 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.2
GPNMB-213ENST00000492512 CCPG1Q9ULG6 757 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.2
GPNMB-213ENST00000492512 ARIH1Q9Y4X5 557 aaPredicted RBP16.27■□□□□ 0.2
GPNMB-213ENST00000492512 TRIP12Q14669 1992 aaPredicted RBP16.26■□□□□ 0.19
GPNMB-213ENST00000492512 SCN10AQ9Y5Y9 1956 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 EPOPA6NHQ4 379 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 KIF28PB7ZC32 967 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 RFC2P35250 354 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 TAP1Q03518 808 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 TMEM31Q5JXX7 168 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 PPP4R3BQ5MIZ7 849 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 MORC4Q8TE76 937 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 HLA-CQ95604 372 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 PURBQ96QR8 312 aaKnown RBP16.26■□□□□ 0.19
GPNMB-213ENST00000492512 MTG1Q9BT17 334 aaPredicted RBP16.26■□□□□ 0.19
GPNMB-213ENST00000492512 FTOQ9C0B1 505 aaKnown RBP eCLIP16.26■□□□□ 0.19
GPNMB-213ENST00000492512 STX8Q9UNK0 236 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 TANC1Q9C0D5 1861 aa16.26■□□□□ 0.19
GPNMB-213ENST00000492512 TLL1O43897 1013 aa16.25■□□□□ 0.19
GPNMB-213ENST00000492512 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
GPNMB-213ENST00000492512 HERC6Q8IVU3 1022 aa16.25■□□□□ 0.19
GPNMB-213ENST00000492512 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
GPNMB-213ENST00000492512 OR6J1Q8NGC5 347 aa16.25■□□□□ 0.19
GPNMB-213ENST00000492512 NAPBQ9H115 298 aa16.25■□□□□ 0.19
GPNMB-213ENST00000492512 PIEZO1Q92508 2521 aa16.25■□□□□ 0.19
GPNMB-213ENST00000492512 MUC6Q6W4X9 2439 aa16.24■□□□□ 0.19
GPNMB-213ENST00000492512 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
GPNMB-213ENST00000492512 ICAM1P05362 532 aa16.24■□□□□ 0.19
GPNMB-213ENST00000492512 ALDH5A1P51649 535 aaPredicted RBP16.24■□□□□ 0.19
GPNMB-213ENST00000492512 PPARAQ07869 468 aa16.24■□□□□ 0.19
GPNMB-213ENST00000492512 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
GPNMB-213ENST00000492512 LRRFIP1Q32MZ4 808 aaKnown RBP16.24■□□□□ 0.19
GPNMB-213ENST00000492512 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
GPNMB-213ENST00000492512 MTMR7Q9Y216 660 aa16.24■□□□□ 0.19
GPNMB-213ENST00000492512 RAD50Q92878 1312 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 TSPY2A6NKD2 308 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 ARHGEF15O94989 841 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 IQCF3P0C7M6 154 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 GRB10Q13322 594 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 BFSP2Q13515 415 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
GPNMB-213ENST00000492512 CCDC96Q2M329 555 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 NFRKBQ6P4R8 1299 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 NOD1Q9Y239 953 aa16.23■□□□□ 0.19
GPNMB-213ENST00000492512 COL4A4P53420 1690 aaPredicted RBP16.22■□□□□ 0.19
GPNMB-213ENST00000492512 PTPRSQ13332 1948 aa16.22■□□□□ 0.19
GPNMB-213ENST00000492512 RBM47A0AV96 593 aaKnown RBP16.22■□□□□ 0.19
GPNMB-213ENST00000492512 PTPDC1A2A3K4 754 aa16.22■□□□□ 0.19
GPNMB-213ENST00000492512 KCNJ6P48051 423 aa16.22■□□□□ 0.19
GPNMB-213ENST00000492512 RASGRP2Q7LDG7 609 aa16.22■□□□□ 0.19
GPNMB-213ENST00000492512 PPP1R13LQ8WUF5 828 aa16.22■□□□□ 0.19
GPNMB-213ENST00000492512 SEC62Q99442 399 aaKnown RBP16.22■□□□□ 0.19
GPNMB-213ENST00000492512 NFIBO00712 420 aa16.21■□□□□ 0.19
GPNMB-213ENST00000492512 NKRFO15226 690 aaKnown RBP eCLIP16.21■□□□□ 0.19
GPNMB-213ENST00000492512 NMT2O60551 498 aa16.21■□□□□ 0.19
GPNMB-213ENST00000492512 KPNA6O60684 536 aa16.21■□□□□ 0.19
GPNMB-213ENST00000492512 BAIAP3O94812 1187 aa16.21■□□□□ 0.19
GPNMB-213ENST00000492512 PTPN11Q06124 597 aaPredicted RBP16.21■□□□□ 0.19
GPNMB-213ENST00000492512 PPP2R5BQ15173 497 aa16.21■□□□□ 0.19
GPNMB-213ENST00000492512 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.19
GPNMB-213ENST00000492512 RANBP17Q9H2T7 1088 aaKnown RBP16.21■□□□□ 0.19
GPNMB-213ENST00000492512 IL17RBQ9NRM6 502 aa16.21■□□□□ 0.19
GPNMB-213ENST00000492512 GPR37L1O60883 481 aa16.2■□□□□ 0.18
GPNMB-213ENST00000492512 CALML3P27482 149 aa16.2■□□□□ 0.18
GPNMB-213ENST00000492512 SLC16A2P36021 539 aa16.2■□□□□ 0.18
GPNMB-213ENST00000492512 CHMP4BP1P59074 171 aa16.2■□□□□ 0.18
GPNMB-213ENST00000492512 PDE4DQ08499 809 aa16.2■□□□□ 0.18
GPNMB-213ENST00000492512 SPRED2Q7Z698 418 aa16.2■□□□□ 0.18
GPNMB-213ENST00000492512 SCFD2Q8WU76 684 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms