RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.5
SNED1-211ENST00000491761 RASGRP2Q7LDG7 609 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 OTUD6BQ8N6M0 293 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 ALS2CR12Q96Q35 445 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 TMEM47Q9BQJ4 181 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 WNT7AO00755 349 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 HSF2BPO75031 334 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 GYPCP04921 128 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 HPDP32754 393 aaPredicted RBP11.96□□□□□ -0.5
SNED1-211ENST00000491761 GRAPQ13588 217 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 CNNM4Q6P4Q7 775 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 SV2BQ7L1I2 683 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 NEK8Q86SG6 692 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.5
SNED1-211ENST00000491761 DHTKD1Q96HY7 919 aaPredicted RBP11.96□□□□□ -0.5
SNED1-211ENST00000491761 SCLT1Q96NL6 688 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 EPC1Q9H2F5 836 aa11.96□□□□□ -0.5
SNED1-211ENST00000491761 RGL2O15211 777 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 GBP2P32456 591 aaPredicted RBP11.95□□□□□ -0.5
SNED1-211ENST00000491761 CCDC42Q96M95 316 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 NOC4LQ9BVI4 516 aaKnown RBP11.95□□□□□ -0.5
SNED1-211ENST00000491761 LRRC27Q9C0I9 530 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 THAP9Q9H5L6 903 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 BARHL2Q9NY43 387 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 GGA1Q9UJY5 639 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 PRDM4Q9UKN5 801 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 MCM3P25205 808 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 E2F4Q16254 413 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 REXO1Q8N1G1 1221 aaKnown RBP11.95□□□□□ -0.5
SNED1-211ENST00000491761 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 SPAG5Q96R06 1193 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 PCDHA6Q9UN73 950 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 PCDHA8Q9Y5H6 950 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 ITGB4P16144 1822 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 PP2D1A8MPX8 630 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 IVLP07476 585 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 TXKP42681 527 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 KIF5AQ12840 1032 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 SMC1AQ14683 1233 aaKnown RBP11.95□□□□□ -0.5
SNED1-211ENST00000491761 CC2D1AQ6P1N0 951 aaPredicted RBP11.95□□□□□ -0.5
SNED1-211ENST00000491761 MB21D1Q8N884 522 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 MED15Q96RN5 788 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 HAUS4Q9H6D7 363 aa11.95□□□□□ -0.5
SNED1-211ENST00000491761 CCDC151A5D8V7 595 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 TRIM49BA6NDI0 452 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 KCNB1Q14721 858 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 HDXQ7Z353 690 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 LGALS16A8MUM7 142 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 TECP42680 631 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 CKAP4Q07065 602 aaKnown RBP11.94□□□□□ -0.5
SNED1-211ENST00000491761 TXNRD3Q86VQ6 643 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 ADSSL1Q8N142 457 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 ZNF384Q8TF68 577 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 PAIP2Q9BPZ3 127 aaKnown RBP11.94□□□□□ -0.5
SNED1-211ENST00000491761 TUBGCP2Q9BSJ2 902 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 CCSER1Q9C0I3 900 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 PLCG1P19174 1290 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 EVX2Q03828 476 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 SEMA3FQ13275 785 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 PRKG1Q13976 671 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 KRT79Q5XKE5 535 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 RCSD1Q6JBY9 416 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
SNED1-211ENST00000491761 SHISA4Q96DD7 197 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 ZNF446Q9NWS9 450 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 BIN2Q9UBW5 565 aaPredicted RBP11.94□□□□□ -0.5
SNED1-211ENST00000491761 LRWD1Q9UFC0 647 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 BAZ2BQ9UIF8 2168 aaKnown RBP11.94□□□□□ -0.5
SNED1-211ENST00000491761 ANKRD36CQ5JPF3 1778 aa11.94□□□□□ -0.5
SNED1-211ENST00000491761 NDUFA10O95299 355 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 ATP2B4P23634 1241 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 CDK8P49336 464 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 PICALMQ13492 652 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 ZSCAN26Q16670 478 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 VPS36Q86VN1 386 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 P2RX5Q93086 422 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
SNED1-211ENST00000491761 FHOD1Q9Y613 1164 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 SHANK3Q9BYB0 1731 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 VEGFAP15692 232 aaPredicted RBP11.93□□□□□ -0.5
SNED1-211ENST00000491761 PRPHP41219 470 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 NPY5RQ15761 445 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 LONRF2Q1L5Z9 754 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 MFSD14BQ5SR56 506 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 JAKMIP2Q96AA8 810 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 TIAM2Q8IVF5 1701 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 FAM205AQ6ZU69 1335 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 B4DLN1 442 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 CCNE1P24864 410 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 CALCRLQ16602 461 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 MICALCLQ6ZW33 695 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 TBC1D22AQ8WUA7 517 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 KIFC2Q96AC6 838 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 TMEM60Q9H2L4 133 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 MAD2L2Q9UI95 211 aa11.93□□□□□ -0.5
SNED1-211ENST00000491761 TNNI2P48788 182 aa11.92□□□□□ -0.5
SNED1-211ENST00000491761 ADCY7P51828 1080 aa11.92□□□□□ -0.5
SNED1-211ENST00000491761 PAF1Q8N7H5 531 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms