RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 PFKFB2O60825 505 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 HOXC6P09630 235 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 IFNAR1P17181 557 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 XBP1P17861 261 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 STK3Q13188 491 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 COL9A3Q14050 684 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-214ENST00000491584 NSMFQ6X4W1 530 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 RNF207Q6ZRF8 634 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPN7-214ENST00000491584 MSL3Q8N5Y2 521 aaKnown RBP13.78□□□□□ -0.2
PTPN7-214ENST00000491584 PIBF1Q8WXW3 757 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 APBA2Q99767 749 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 RIPK3Q9Y572 518 aa13.78□□□□□ -0.2
PTPN7-214ENST00000491584 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.21
PTPN7-214ENST00000491584 ASB14A6NK59 587 aa13.77□□□□□ -0.21
PTPN7-214ENST00000491584 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
PTPN7-214ENST00000491584 MCTP2Q6DN12 878 aa13.77□□□□□ -0.21
PTPN7-214ENST00000491584 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-214ENST00000491584 DIS3LQ8TF46 1054 aaKnown RBP13.77□□□□□ -0.21
PTPN7-214ENST00000491584 RNF26Q9BY78 433 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-214ENST00000491584 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
PTPN7-214ENST00000491584 LOC102724159A0A0B4J2E5 919 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 GCOM1H8Y6P7 765 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-214ENST00000491584 CYTH3O43739 400 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 POLR2MP0CAP2 368 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 CAPN2P17655 700 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 CDC27P30260 824 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 TRIM32Q13049 653 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 PWP2Q15269 919 aaKnown RBP13.76□□□□□ -0.21
PTPN7-214ENST00000491584 NOL8Q76FK4 1167 aaKnown RBP13.76□□□□□ -0.21
PTPN7-214ENST00000491584 HEATR3Q7Z4Q2 680 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 ZNF467Q7Z7K2 595 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-214ENST00000491584 CMTR1Q8N1G2 835 aaKnown RBP13.76□□□□□ -0.21
PTPN7-214ENST00000491584 USP6NLQ92738 828 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
PTPN7-214ENST00000491584 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTPN7-214ENST00000491584 PSTPIP2Q9H939 334 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 KIF3AQ9Y496 699 aa13.76□□□□□ -0.21
PTPN7-214ENST00000491584 NID2Q14112 1375 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 SOX1O00570 391 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-214ENST00000491584 DEXIO95424 95 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 CFBP00751 764 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 HMGCRP04035 888 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 SCG2P13521 617 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 GNA11P29992 359 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 BAATQ14032 418 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-214ENST00000491584 MAP3K21Q5TCX8 1036 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 OLFML2BQ68BL8 750 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 DNERQ8NFT8 737 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 BICD2Q8TD16 824 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 KIF2CQ99661 725 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 EHMT1Q9H9B1 1298 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 A1CFQ9NQ94 594 aaKnown RBP13.75□□□□□ -0.21
PTPN7-214ENST00000491584 FAM217BQ9NTX9 383 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-214ENST00000491584 CYP39A1Q9NYL5 469 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 NRBP1Q9UHY1 535 aa13.75□□□□□ -0.21
PTPN7-214ENST00000491584 A0A1W2PPC1 479 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 PGK2P07205 417 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 CALML3P27482 149 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 NAPAP54920 295 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 PFKFB3Q16875 520 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-214ENST00000491584 ZNF792Q3KQV3 632 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 MUM1L1Q5H9M0 696 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 CCDC148Q8NFR7 591 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 SMARCC2Q8TAQ2 1214 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 NSUN6Q8TEA1 469 aaKnown RBP13.74□□□□□ -0.21
PTPN7-214ENST00000491584 CLEC4DQ8WXI8 215 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 TRIB2Q92519 343 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 PAWRQ96IZ0 340 aaKnown RBP13.74□□□□□ -0.21
PTPN7-214ENST00000491584 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
PTPN7-214ENST00000491584 NCOA5Q9HCD5 579 aaKnown RBP13.74□□□□□ -0.21
PTPN7-214ENST00000491584 C6orf50Q9HD87 102 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 SH3GLB2Q9NR46 395 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 UNC80Q8N2C7 3258 aa13.74□□□□□ -0.21
PTPN7-214ENST00000491584 DNAJC25-GNG10A0A024R161 153 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 COBLO75128 1261 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 FOSP01100 380 aaPredicted RBP13.73□□□□□ -0.21
PTPN7-214ENST00000491584 TFRCP02786 760 aaKnown RBP13.73□□□□□ -0.21
PTPN7-214ENST00000491584 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
PTPN7-214ENST00000491584 FUT2Q10981 343 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 TRIM29Q14134 588 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 ME3Q16798 604 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 ANKLE1Q8NAG6 615 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 GTF3C6Q969F1 213 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 IWS1Q96ST2 819 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 TINF2Q9BSI4 451 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 HMX1Q9NP08 348 aaPredicted RBP13.73□□□□□ -0.21
PTPN7-214ENST00000491584 BARHL2Q9NY43 387 aa13.73□□□□□ -0.21
PTPN7-214ENST00000491584 RPTORQ8N122 1335 aa13.72□□□□□ -0.21
PTPN7-214ENST00000491584 SMCO2A6NFE2 343 aa13.72□□□□□ -0.21
PTPN7-214ENST00000491584 NFIBO00712 420 aa13.72□□□□□ -0.21
PTPN7-214ENST00000491584 ADCY7P51828 1080 aa13.72□□□□□ -0.21
PTPN7-214ENST00000491584 HMGN5P82970 282 aaKnown RBP13.72□□□□□ -0.21
PTPN7-214ENST00000491584 PDE4DQ08499 809 aa13.72□□□□□ -0.21
PTPN7-214ENST00000491584 SCRN1Q12765 414 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms