RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SLC1A4	P43007	532 aa		22.9	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	BRDT	Q58F21	947 aa	Predicted RBP	22.9	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	FAM47C	Q5HY64	1035 aa		22.9	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	MORC4	Q8TE76	937 aa		22.9	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	WDR11	Q9BZH6	1224 aa		22.9	■■□□□ 1.26
CDK5RAP2-218	ENST00000491334	PLA2G6	O60733	806 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	BAIAP3	O94812	1187 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	ARHGEF15	O94989	841 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	TSPY3	P0CV98	308 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	TSPY8	P0CW00	308 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	BFSP2	Q13515	415 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	NBPF20	Q3BBV1	942 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	NEDD1	Q8NHV4	660 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	GMCL1	Q96IK5	515 aa		22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	ADD3	Q9UEY8	706 aa	Known RBP	22.89	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PRR33	A8MZF0	331 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	KPNA6	O60684	536 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	LPXN	O60711	386 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	APP	P05067	770 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	KCNJ6	P48051	423 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	TDO2	P48775	406 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	MUM1L1	Q5H9M0	696 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	NFRKB	Q6P4R8	1299 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	NSMF	Q6X4W1	530 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	LRRC37A2	A6NM11	1700 aa		22.88	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	BRWD1	Q9NSI6	2320 aa		22.87	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	CCER2	I3L3R5	266 aa		22.87	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	GNAT2	P19087	354 aa		22.87	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	MCC	P23508	829 aa		22.87	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PANK1	Q8TE04	598 aa		22.87	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	ZBED2	Q9BTP6	218 aa		22.87	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	CD320	Q9NPF0	282 aa		22.87	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	MYH4	Q9Y623	1939 aa		22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	LOC102724159	A0A0B4J2E5	919 aa		22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PTPN11	Q06124	597 aa	Predicted RBP	22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PDE4B	Q07343	736 aa		22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PWP2	Q15269	919 aa	Known RBP	22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PPP4R3B	Q5MIZ7	849 aa		22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	RCSD1	Q6JBY9	416 aa		22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	OR6J1	Q8NGC5	347 aa		22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	NOD1	Q9Y239	953 aa		22.86	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	RAD50	Q92878	1312 aa		22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	RBM47	A0AV96	593 aa	Known RBP	22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	TFAP4	Q01664	338 aa		22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	LRRFIP1	Q32MZ4	808 aa	Known RBP	22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	SIRT2	Q8IXJ6	389 aa		22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	GJD3	Q8N144	294 aa		22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	APPBP2	Q92624	585 aa		22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	OSBP2	Q969R2	916 aa		22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	CCPG1	Q9ULG6	757 aa		22.85	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	SLC3A2	P08195	630 aa	Known RBP	22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	MS4A1	P11836	297 aa		22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	ALAD	P13716	330 aa		22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	SNAP25	P60880	206 aa		22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	KCTD1	Q719H9	257 aa		22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	FAM178B	Q8IXR5	827 aa		22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	CHMP4C	Q96CF2	233 aa		22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PURB	Q96QR8	312 aa	Known RBP	22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PRR12	Q9ULL5	1215 aa		22.84	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	SCN5A	Q14524	2016 aa		22.83	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	22.83	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PATL2	C9JE40	543 aa	Known RBP	22.83	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	NKRF	O15226	690 aa	Known RBP eCLIP	22.83	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	BAAT	Q14032	418 aa	Predicted RBP	22.83	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	CCDC155	Q8N6L0	562 aa		22.83	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	UBE2Z	Q9H832	354 aa	Predicted RBP	22.83	■■□□□ 1.25
CDK5RAP2-218	ENST00000491334	PLIN4	Q96Q06	1357 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	RNF113A	O15541	343 aa	Known RBP	22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	GPAA1	O43292	621 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	ICAM1	P05362	532 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	ZFY	P08048	801 aa	Predicted RBP	22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	ALDH5A1	P51649	535 aa	Predicted RBP	22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	LEXM	Q3ZCV2	418 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	SPRED2	Q7Z698	418 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	IFNL3	Q8IZI9	196 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	KBTBD3	Q8NAB2	608 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	GDPD5	Q8WTR4	605 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	UIMC1	Q96RL1	719 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	NACAP1	Q9BZK3	213 aa		22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	22.82	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	MYH7	P12883	1935 aa		22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	LCHN	A4D1U4	455 aa		22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334		A6NJR5	290 aa		22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	SSTR3	P32745	418 aa	Predicted RBP	22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	WDR5	P61964	334 aa	Known RBP	22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	CSPP1	Q1MSJ5	1256 aa		22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	CAGE1	Q8TC20	777 aa		22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	TGS1	Q96RS0	853 aa	Known RBP	22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	MPHOSPH6	Q99547	160 aa	Known RBP	22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	RAD9A	Q99638	391 aa		22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	SUGCT	Q9HAC7	445 aa		22.81	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	PARN	O95453	639 aa	Known RBP	22.8	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	MRE11	P49959	708 aa		22.8	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	PPP2R5B	Q15173	497 aa		22.8	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	AFAP1L1	Q8TED9	768 aa		22.8	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	LRRCC1	Q9C099	1032 aa		22.8	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	STX8	Q9UNK0	236 aa		22.8	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	KCNA5	P22460	613 aa		22.79	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	ERVK-21	P61565	698 aa		22.79	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	PTGIS	Q16647	500 aa		22.79	■■□□□ 1.24

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms