RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SH3RF1Q7Z6J0 888 aa36.58■■■■□ 3.45
LDB1-204ENST00000490751 TLK2Q86UE8 772 aa36.58■■■■□ 3.45
LDB1-204ENST00000490751 GLT1D1Q96MS3 346 aa36.58■■■■□ 3.45
LDB1-204ENST00000490751 LSG1Q9H089 658 aaKnown RBP36.58■■■■□ 3.45
LDB1-204ENST00000490751 PQBP1O60828 265 aaKnown RBP36.57■■■■□ 3.44
LDB1-204ENST00000490751 NKX3-2P78367 333 aa36.57■■■■□ 3.44
LDB1-204ENST00000490751 BEX3Q00994 111 aa36.57■■■■□ 3.44
LDB1-204ENST00000490751 BMP2KLQ5H9B9 411 aa36.57■■■■□ 3.44
LDB1-204ENST00000490751 SENP2Q9HC62 589 aa36.57■■■■□ 3.44
LDB1-204ENST00000490751 MAD2L2Q9UI95 211 aa36.57■■■■□ 3.44
LDB1-204ENST00000490751 KLRF2D3W0D1 207 aa36.56■■■■□ 3.44
LDB1-204ENST00000490751 PTGS1P23219 599 aa36.56■■■■□ 3.44
LDB1-204ENST00000490751 WTAPQ15007 396 aa36.56■■■■□ 3.44
LDB1-204ENST00000490751 SART3Q15020 963 aaKnown RBP36.56■■■■□ 3.44
LDB1-204ENST00000490751 FBXO11Q86XK2 927 aa36.56■■■■□ 3.44
LDB1-204ENST00000490751 RGS22Q8NE09 1264 aa36.56■■■■□ 3.44
LDB1-204ENST00000490751 ELP1O95163 1332 aa36.56■■■■□ 3.44
LDB1-204ENST00000490751 TRIM43BA6NCK2 446 aa36.55■■■■□ 3.44
LDB1-204ENST00000490751 CLTBP09497 229 aa36.55■■■■□ 3.44
LDB1-204ENST00000490751 ANTXR2P58335 489 aa36.55■■■■□ 3.44
LDB1-204ENST00000490751 TMEM63BQ5T3F8 832 aa36.55■■■■□ 3.44
LDB1-204ENST00000490751 MB21D2Q8IYB1 491 aaPredicted RBP36.55■■■■□ 3.44
LDB1-204ENST00000490751 DNERQ8NFT8 737 aa36.55■■■■□ 3.44
LDB1-204ENST00000490751 TRIM43Q96BQ3 446 aaPredicted RBP36.55■■■■□ 3.44
LDB1-204ENST00000490751 AP5M1Q9H0R1 490 aa36.55■■■■□ 3.44
LDB1-204ENST00000490751 PALM3A6NDB9 673 aaPredicted RBP36.54■■■■□ 3.44
LDB1-204ENST00000490751 LRCH3Q96II8 777 aa36.54■■■■□ 3.44
LDB1-204ENST00000490751 MPHOSPH6Q99547 160 aaKnown RBP36.54■■■■□ 3.44
LDB1-204ENST00000490751 LAMA3Q16787 3333 aa36.54■■■■□ 3.44
LDB1-204ENST00000490751 SZT2Q5T011 3432 aa36.53■■■■□ 3.44
LDB1-204ENST00000490751 DYNC1LI2O43237 492 aaPredicted RBP36.53■■■■□ 3.44
LDB1-204ENST00000490751 PDE4DQ08499 809 aa36.53■■■■□ 3.44
LDB1-204ENST00000490751 GRM4Q14833 912 aa36.53■■■■□ 3.44
LDB1-204ENST00000490751 TMEM67Q5HYA8 995 aa36.53■■■■□ 3.44
LDB1-204ENST00000490751 TBC1D5Q92609 795 aa36.53■■■■□ 3.44
LDB1-204ENST00000490751 VTI1AQ96AJ9 217 aa36.53■■■■□ 3.44
LDB1-204ENST00000490751 MRPL11Q9Y3B7 192 aaKnown RBP36.53■■■■□ 3.44
LDB1-204ENST00000490751 EDNRBP24530 442 aa36.52■■■■□ 3.44
LDB1-204ENST00000490751 FSCN1Q16658 493 aaKnown RBP36.52■■■■□ 3.44
LDB1-204ENST00000490751 ANKRD33Q7Z3H0 272 aa36.52■■■■□ 3.44
LDB1-204ENST00000490751 BADQ92934 168 aa36.52■■■■□ 3.44
LDB1-204ENST00000490751 TOX2Q96NM4 488 aa36.52■■■■□ 3.44
LDB1-204ENST00000490751 MAF1Q9H063 256 aa36.52■■■■□ 3.44
LDB1-204ENST00000490751 Q9Y3F1 56 aa36.52■■■■□ 3.44
LDB1-204ENST00000490751 LRIT3Q3SXY7 679 aa36.51■■■■□ 3.44
LDB1-204ENST00000490751 MCF2L2Q86YR7 1114 aa36.51■■■■□ 3.44
LDB1-204ENST00000490751 AMNQ9BXJ7 453 aa36.51■■■■□ 3.44
LDB1-204ENST00000490751 ANO2Q9NQ90 1003 aa36.51■■■■□ 3.44
LDB1-204ENST00000490751 DCDC2CA8MYV0 355 aa36.5■■■■□ 3.43
LDB1-204ENST00000490751 DUSP28Q4G0W2 176 aa36.5■■■■□ 3.43
LDB1-204ENST00000490751 IGDCC4Q8TDY8 1250 aa36.5■■■■□ 3.43
LDB1-204ENST00000490751 MTMR8Q96EF0 704 aa36.5■■■■□ 3.43
LDB1-204ENST00000490751 WDR11Q9BZH6 1224 aa36.5■■■■□ 3.43
LDB1-204ENST00000490751 A0A0U1RQG5 324 aaPredicted RBP36.49■■■■□ 3.43
LDB1-204ENST00000490751 RBM47A0AV96 593 aaKnown RBP36.49■■■■□ 3.43
LDB1-204ENST00000490751 B4DLN1 442 aa36.49■■■■□ 3.43
LDB1-204ENST00000490751 SLC27A2O14975 620 aa36.49■■■■□ 3.43
LDB1-204ENST00000490751 MRPL12P52815 198 aaKnown RBP36.49■■■■□ 3.43
LDB1-204ENST00000490751 FAAP100Q0VG06 881 aa36.49■■■■□ 3.43
LDB1-204ENST00000490751 TROAPQ12815 778 aa36.49■■■■□ 3.43
LDB1-204ENST00000490751 CXCL17Q6UXB2 119 aa36.49■■■■□ 3.43
LDB1-204ENST00000490751 SYTL5Q8TDW5 730 aaPredicted RBP36.49■■■■□ 3.43
LDB1-204ENST00000490751 ZBTB5O15062 677 aa36.48■■■■□ 3.43
LDB1-204ENST00000490751 KIAA0355O15063 1070 aa36.48■■■■□ 3.43
LDB1-204ENST00000490751 CATIPQ7Z7H3 387 aa36.48■■■■□ 3.43
LDB1-204ENST00000490751 TMEM39AQ9NV64 488 aa36.48■■■■□ 3.43
LDB1-204ENST00000490751 COL20A1Q9P218 1284 aa36.48■■■■□ 3.43
LDB1-204ENST00000490751 MROH7Q68CQ1 1323 aa36.48■■■■□ 3.43
LDB1-204ENST00000490751 ARVCFO00192 962 aa36.47■■■■□ 3.43
LDB1-204ENST00000490751 ZEB2O60315 1214 aa36.47■■■■□ 3.43
LDB1-204ENST00000490751 PPP1R11O60927 126 aaPredicted RBP36.47■■■■□ 3.43
LDB1-204ENST00000490751 ITGB8P26012 769 aa36.47■■■■□ 3.43
LDB1-204ENST00000490751 CDK7P50613 346 aa36.47■■■■□ 3.43
LDB1-204ENST00000490751 SLC35G1Q2M3R5 365 aa36.47■■■■□ 3.43
LDB1-204ENST00000490751 HOMER1Q86YM7 354 aa36.47■■■■□ 3.43
LDB1-204ENST00000490751 TAAR1Q96RJ0 339 aa36.47■■■■□ 3.43
LDB1-204ENST00000490751 CREB3L3Q68CJ9 461 aa36.46■■■■□ 3.43
LDB1-204ENST00000490751 CASC1Q6TDU7 716 aa36.46■■■■□ 3.43
LDB1-204ENST00000490751 RIOX1Q9H6W3 641 aa36.46■■■■□ 3.43
LDB1-204ENST00000490751 BAZ2BQ9UIF8 2168 aaKnown RBP36.45■■■■□ 3.43
LDB1-204ENST00000490751 PRC1O43663 620 aa36.45■■■■□ 3.43
LDB1-204ENST00000490751 CABYRO75952 493 aa36.45■■■■□ 3.43
LDB1-204ENST00000490751 RAG1P15918 1043 aa36.45■■■■□ 3.43
LDB1-204ENST00000490751 NECTIN1Q15223 517 aa36.45■■■■□ 3.43
LDB1-204ENST00000490751 CCDC136Q96JN2 1154 aa36.45■■■■□ 3.43
LDB1-204ENST00000490751 LY9Q9HBG7 655 aa36.45■■■■□ 3.43
LDB1-204ENST00000490751 GPHNQ9NQX3 736 aaPredicted RBP36.45■■■■□ 3.43
LDB1-204ENST00000490751 CFBP00751 764 aa36.44■■■■□ 3.42
LDB1-204ENST00000490751 PPP2R5BQ15173 497 aa36.44■■■■□ 3.42
LDB1-204ENST00000490751 NSUN6Q8TEA1 469 aaKnown RBP36.44■■■■□ 3.42
LDB1-204ENST00000490751 SCFD2Q8WU76 684 aa36.44■■■■□ 3.42
LDB1-204ENST00000490751 PIGSQ96S52 555 aa36.44■■■■□ 3.42
LDB1-204ENST00000490751 PCDHA1Q9Y5I3 950 aa36.44■■■■□ 3.42
LDB1-204ENST00000490751 OPLAHO14841 1288 aa36.43■■■■□ 3.42
LDB1-204ENST00000490751 CYTH3O43739 400 aa36.43■■■■□ 3.42
LDB1-204ENST00000490751 MCM5P33992 734 aa36.43■■■■□ 3.42
LDB1-204ENST00000490751 RMDN3Q96TC7 470 aa36.43■■■■□ 3.42
LDB1-204ENST00000490751 MTA3Q9BTC8 594 aa36.43■■■■□ 3.42
LDB1-204ENST00000490751 COL9A3Q14050 684 aaPredicted RBP36.42■■■■□ 3.42
LDB1-204ENST00000490751 ZNF654Q8IZM8 581 aa36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms