RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PPP1R12CQ9BZL4 782 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 CTDP1Q9Y5B0 961 aaPredicted RBP14.14□□□□□ -0.15
SHOX2-205ENST00000490689 LMTK2Q8IWU2 1503 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 PALLDQ8WX93 1383 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 ABL1P00519 1130 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 OR52Z1P0C646 297 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 BMP6P22004 513 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 CCNE1P24864 410 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 PPP1R2P41236 205 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 CALCOCO2Q13137 446 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 EZH2Q15910 746 aaKnown RBP14.14□□□□□ -0.15
SHOX2-205ENST00000490689 SPATS2Q86XZ4 545 aaKnown RBP14.14□□□□□ -0.15
SHOX2-205ENST00000490689 NDST4Q9H3R1 872 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 EIF4E1BA6NMX2 242 aaKnown RBP14.14□□□□□ -0.15
SHOX2-205ENST00000490689 ZRSR2Q15696 482 aaKnown RBP14.14□□□□□ -0.15
SHOX2-205ENST00000490689 DISC1Q9NRI5 854 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 PCDHB13Q9Y5F0 798 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 HNRNPH1P31943 449 aaKnown RBP14.13□□□□□ -0.15
SHOX2-205ENST00000490689 DHX9Q08211 1270 aaKnown RBP14.13□□□□□ -0.15
SHOX2-205ENST00000490689 FAM133AQ8N9E0 248 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 ZNF526Q8TF50 670 aaPredicted RBP14.13□□□□□ -0.15
SHOX2-205ENST00000490689 DHTKD1Q96HY7 919 aaPredicted RBP14.13□□□□□ -0.15
SHOX2-205ENST00000490689 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 TOB1P50616 345 aaPredicted RBP14.13□□□□□ -0.15
SHOX2-205ENST00000490689 CCDC50Q8IVM0 306 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 MYOCDQ8IZQ8 938 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 REXO1Q8N1G1 1221 aaKnown RBP14.13□□□□□ -0.15
SHOX2-205ENST00000490689 MSANTD4Q8NCY6 345 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 CXorf56Q9H5V9 222 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 CHUKO15111 745 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 DENND2CQ68D51 928 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 HOOK3Q86VS8 718 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 MAPKAPK5Q8IW41 473 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 CCDC63Q8NA47 563 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 RETREG2Q8NC44 543 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 MAP3K14Q99558 947 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 LACRTQ9GZZ8 138 aa14.13□□□□□ -0.15
SHOX2-205ENST00000490689 DMGDHQ9UI17 866 aaKnown RBP14.13□□□□□ -0.15
SHOX2-205ENST00000490689 EIF3HO15372 352 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHOX2-205ENST00000490689 PALMO75781 387 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 SGMS1Q86VZ5 419 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 RFX7Q2KHR2 1363 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 ARAP3Q8WWN8 1544 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 LRRC53A6NM62 1247 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 PRPF3O43395 683 aaKnown RBP14.12□□□□□ -0.15
SHOX2-205ENST00000490689 VPS41P49754 854 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 APBA1Q02410 837 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 CETN1Q12798 172 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 HLFQ16534 295 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 ARHGAP44Q17R89 818 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 TBC1D1Q86TI0 1168 aaPredicted RBP14.12□□□□□ -0.15
SHOX2-205ENST00000490689 VSIG1Q86XK7 387 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 RDH13Q8NBN7 331 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 COL15A1P39059 1388 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 GSG1L2A8MUP6 293 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 C6orf229H3BNL8 230 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 FLOT1O75955 427 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 LDHCP07864 332 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 SARNPP82979 210 aaKnown RBP14.12□□□□□ -0.15
SHOX2-205ENST00000490689 ZKSCAN8Q15776 578 aaPredicted RBP14.12□□□□□ -0.15
SHOX2-205ENST00000490689 KRT25Q7Z3Z0 450 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 ENAHQ8N8S7 591 aaPredicted RBP14.12□□□□□ -0.15
SHOX2-205ENST00000490689 ATG3Q9NT62 314 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHOX2-205ENST00000490689 KLRF2D3W0D1 207 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 ADAMTS2O95450 1211 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 DPYDQ12882 1025 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 MTMR3Q13615 1198 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 NBPF5PQ86XG9 351 aaPredicted RBP14.12□□□□□ -0.15
SHOX2-205ENST00000490689 ARL8AQ96BM9 186 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 THAP9Q9H5L6 903 aa14.12□□□□□ -0.15
SHOX2-205ENST00000490689 ANKARQ7Z5J8 1434 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 SPOPO43791 374 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 TNFAIP3P21580 790 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 TEX11Q8IYF3 940 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 STMN4Q9H169 189 aaPredicted RBP14.11□□□□□ -0.15
SHOX2-205ENST00000490689 CTTNBP2NLQ9P2B4 639 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 SNX12Q9UMY4 172 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 USP32Q8NFA0 1604 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 PPP1R3GB7ZBB8 358 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 LDHBP07195 334 aaKnown RBP14.11□□□□□ -0.15
SHOX2-205ENST00000490689 PLEKP08567 350 aaPredicted RBP14.11□□□□□ -0.15
SHOX2-205ENST00000490689 FCER1AP12319 257 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 ZNF18P17022 549 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 PLTPP55058 493 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 VWA3BQ502W6 1294 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 INTS8Q75QN2 995 aaKnown RBP14.11□□□□□ -0.15
SHOX2-205ENST00000490689 CCDC105Q8IYK2 499 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 VIPAS39Q9H9C1 493 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 LIMA1Q9UHB6 759 aaKnown RBP14.11□□□□□ -0.15
SHOX2-205ENST00000490689 CPDO75976 1380 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 ANO9A1A5B4 782 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 ATP11AP98196 1134 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 ZBTB16Q05516 673 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 MAN2A1Q16706 1144 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 MEX3CQ5U5Q3 659 aaKnown RBP14.11□□□□□ -0.15
SHOX2-205ENST00000490689 NLRP14Q86W24 1093 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 OR2W6PQ8NHA6 318 aa14.11□□□□□ -0.15
SHOX2-205ENST00000490689 TGFBRAP1Q8WUH2 860 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms