RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 TNKSO95271 1327 aa23.36■■□□□ 1.33
UPK3B-205ENST00000490360 KIF28PB7ZC32 967 aa23.36■■□□□ 1.33
UPK3B-205ENST00000490360 MCCP23508 829 aa23.36■■□□□ 1.33
UPK3B-205ENST00000490360 TTLL4Q14679 1199 aa23.36■■□□□ 1.33
UPK3B-205ENST00000490360 EEPD1Q7L9B9 569 aa23.36■■□□□ 1.33
UPK3B-205ENST00000490360 VWCEQ96DN2 955 aa23.36■■□□□ 1.33
UPK3B-205ENST00000490360 NECAB3Q96P71 396 aaPredicted RBP23.36■■□□□ 1.33
UPK3B-205ENST00000490360 PITPNM1O00562 1244 aa23.35■■□□□ 1.33
UPK3B-205ENST00000490360 KPNA6O60684 536 aa23.35■■□□□ 1.33
UPK3B-205ENST00000490360 CA3P07451 260 aa23.35■■□□□ 1.33
UPK3B-205ENST00000490360 PURAQ00577 322 aaKnown RBP23.35■■□□□ 1.33
UPK3B-205ENST00000490360 CCPG1Q9ULG6 757 aa23.35■■□□□ 1.33
UPK3B-205ENST00000490360 PRR12Q9ULL5 1215 aa23.35■■□□□ 1.33
UPK3B-205ENST00000490360 HCN4Q9Y3Q4 1203 aa23.35■■□□□ 1.33
UPK3B-205ENST00000490360 RAD50Q92878 1312 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 ICAM1P05362 532 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 KCNQ1P51787 676 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 MUM1L1Q5H9M0 696 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 NSMFQ6X4W1 530 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 MTG1Q9BT17 334 aaPredicted RBP23.34■■□□□ 1.33
UPK3B-205ENST00000490360 WDR11Q9BZH6 1224 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 NAPBQ9H115 298 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 TRMT13Q9NUP7 481 aaKnown RBP23.34■■□□□ 1.33
UPK3B-205ENST00000490360 PNMA2Q9UL42 364 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 STX8Q9UNK0 236 aa23.34■■□□□ 1.33
UPK3B-205ENST00000490360 CYP2C9P11712 490 aa23.33■■□□□ 1.33
UPK3B-205ENST00000490360 PTPN11Q06124 597 aaPredicted RBP23.33■■□□□ 1.33
UPK3B-205ENST00000490360 PPARAQ07869 468 aa23.33■■□□□ 1.33
UPK3B-205ENST00000490360 NFRKBQ6P4R8 1299 aa23.33■■□□□ 1.33
UPK3B-205ENST00000490360 DEFB128Q7Z7B8 93 aa23.33■■□□□ 1.33
UPK3B-205ENST00000490360 RETREG2Q8NC44 543 aa23.33■■□□□ 1.33
UPK3B-205ENST00000490360 MPHOSPH6Q99547 160 aaKnown RBP23.33■■□□□ 1.33
UPK3B-205ENST00000490360 RBM47A0AV96 593 aaKnown RBP23.32■■□□□ 1.32
UPK3B-205ENST00000490360 M0R2C6 588 aa23.32■■□□□ 1.32
UPK3B-205ENST00000490360 NKRFO15226 690 aaKnown RBP eCLIP23.32■■□□□ 1.32
UPK3B-205ENST00000490360 SMARCA5O60264 1052 aaPredicted RBP23.32■■□□□ 1.32
UPK3B-205ENST00000490360 HOXD11P31277 338 aaPredicted RBP23.32■■□□□ 1.32
UPK3B-205ENST00000490360 BFSP2Q13515 415 aa23.32■■□□□ 1.32
UPK3B-205ENST00000490360 KCTD1Q719H9 257 aa23.32■■□□□ 1.32
UPK3B-205ENST00000490360 SCN10AQ9Y5Y9 1956 aa23.32■■□□□ 1.32
UPK3B-205ENST00000490360 TSPY2A6NKD2 308 aa23.31■■□□□ 1.32
UPK3B-205ENST00000490360 BAIAP3O94812 1187 aa23.31■■□□□ 1.32
UPK3B-205ENST00000490360 HLA-CQ95604 372 aa23.31■■□□□ 1.32
UPK3B-205ENST00000490360 LCTP09848 1927 aa23.31■■□□□ 1.32
UPK3B-205ENST00000490360 SCN5AQ14524 2016 aa23.3■■□□□ 1.32
UPK3B-205ENST00000490360 MYL3P08590 195 aa23.3■■□□□ 1.32
UPK3B-205ENST00000490360 IQCF3P0C7M6 154 aa23.3■■□□□ 1.32
UPK3B-205ENST00000490360 PTGS1P23219 599 aa23.3■■□□□ 1.32
UPK3B-205ENST00000490360 ALDH5A1P51649 535 aaPredicted RBP23.3■■□□□ 1.32
UPK3B-205ENST00000490360 TAP1Q03518 808 aa23.3■■□□□ 1.32
UPK3B-205ENST00000490360 HERC6Q8IVU3 1022 aa23.3■■□□□ 1.32
UPK3B-205ENST00000490360 OR6J1Q8NGC5 347 aa23.3■■□□□ 1.32
UPK3B-205ENST00000490360 DCAF4Q8WV16 495 aa23.3■■□□□ 1.32
UPK3B-205ENST00000490360 B4DLN1 442 aa23.29■■□□□ 1.32
UPK3B-205ENST00000490360 TLL1O43897 1013 aa23.29■■□□□ 1.32
UPK3B-205ENST00000490360 MRPL12P52815 198 aaKnown RBP23.29■■□□□ 1.32
UPK3B-205ENST00000490360 BAATQ14032 418 aaPredicted RBP23.29■■□□□ 1.32
UPK3B-205ENST00000490360 FAM47CQ5HY64 1035 aa23.29■■□□□ 1.32
UPK3B-205ENST00000490360 TMEM31Q5JXX7 168 aa23.29■■□□□ 1.32
UPK3B-205ENST00000490360 TMEM63BQ5T3F8 832 aa23.29■■□□□ 1.32
UPK3B-205ENST00000490360 ARNTL2Q8WYA1 636 aa23.29■■□□□ 1.32
UPK3B-205ENST00000490360 LRFN3Q9BTN0 628 aa23.29■■□□□ 1.32
UPK3B-205ENST00000490360 FTOQ9C0B1 505 aaKnown RBP eCLIP23.29■■□□□ 1.32
UPK3B-205ENST00000490360 RANBP17Q9H2T7 1088 aaKnown RBP23.29■■□□□ 1.32
UPK3B-205ENST00000490360 LMCD1Q9NZU5 365 aa23.29■■□□□ 1.32
UPK3B-205ENST00000490360 DDX49Q9Y6V7 483 aaKnown RBP23.29■■□□□ 1.32
UPK3B-205ENST00000490360 RFXAPO00287 272 aa23.28■■□□□ 1.32
UPK3B-205ENST00000490360 PPP2R5BQ15173 497 aa23.28■■□□□ 1.32
UPK3B-205ENST00000490360 NBPF20Q3BBV1 942 aa23.28■■□□□ 1.32
UPK3B-205ENST00000490360 BTNL9Q6UXG8 535 aa23.28■■□□□ 1.32
UPK3B-205ENST00000490360 CCDC155Q8N6L0 562 aa23.28■■□□□ 1.32
UPK3B-205ENST00000490360 SCFD2Q8WU76 684 aa23.28■■□□□ 1.32
UPK3B-205ENST00000490360 CERS4Q9HA82 394 aa23.28■■□□□ 1.32
UPK3B-205ENST00000490360 TANC1Q9C0D5 1861 aa23.28■■□□□ 1.32
UPK3B-205ENST00000490360 A6NJR5 290 aa23.27■■□□□ 1.32
UPK3B-205ENST00000490360 SNAP25P60880 206 aa23.27■■□□□ 1.32
UPK3B-205ENST00000490360 IL17RBQ9NRM6 502 aa23.27■■□□□ 1.32
UPK3B-205ENST00000490360 NOD1Q9Y239 953 aa23.27■■□□□ 1.32
UPK3B-205ENST00000490360 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.27■■□□□ 1.32
UPK3B-205ENST00000490360 TTC41PQ6P2S7 1318 aa23.27■■□□□ 1.32
UPK3B-205ENST00000490360 PTPDC1A2A3K4 754 aa23.26■■□□□ 1.31
UPK3B-205ENST00000490360 PARNO95453 639 aaKnown RBP23.26■■□□□ 1.31
UPK3B-205ENST00000490360 KCNJ6P48051 423 aa23.26■■□□□ 1.31
UPK3B-205ENST00000490360 NOVP48745 357 aa23.26■■□□□ 1.31
UPK3B-205ENST00000490360 PDE4DQ08499 809 aa23.26■■□□□ 1.31
UPK3B-205ENST00000490360 CCDC96Q2M329 555 aa23.26■■□□□ 1.31
UPK3B-205ENST00000490360 DNERQ8NFT8 737 aa23.26■■□□□ 1.31
UPK3B-205ENST00000490360 PURBQ96QR8 312 aaKnown RBP23.26■■□□□ 1.31
UPK3B-205ENST00000490360 EPHX3Q9H6B9 360 aa23.26■■□□□ 1.31
UPK3B-205ENST00000490360 DCTPP1Q9H773 170 aa23.26■■□□□ 1.31
UPK3B-205ENST00000490360 EPOPA6NHQ4 379 aa23.25■■□□□ 1.31
UPK3B-205ENST00000490360 GPR37L1O60883 481 aa23.25■■□□□ 1.31
UPK3B-205ENST00000490360 CAGE1Q8TC20 777 aa23.25■■□□□ 1.31
UPK3B-205ENST00000490360 CHMP4CQ96CF2 233 aa23.25■■□□□ 1.31
UPK3B-205ENST00000490360 GRB10Q13322 594 aa23.24■■□□□ 1.31
UPK3B-205ENST00000490360 ZMYM1Q5SVZ6 1142 aa23.24■■□□□ 1.31
UPK3B-205ENST00000490360 SYDE2Q5VT97 1194 aa23.24■■□□□ 1.31
UPK3B-205ENST00000490360 RNF207Q6ZRF8 634 aa23.24■■□□□ 1.31
UPK3B-205ENST00000490360 AFAP1L1Q8TED9 768 aa23.24■■□□□ 1.31
UPK3B-205ENST00000490360 SEC62Q99442 399 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms