RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 CCDC148Q8NFR7 591 aa18.51■□□□□ 0.55
CLIC4-203ENST00000489758 CCDC12Q8WUD4 166 aaPredicted RBP18.51■□□□□ 0.55
CLIC4-203ENST00000489758 PHF20Q9BVI0 1012 aa18.51■□□□□ 0.55
CLIC4-203ENST00000489758 KCNJ14Q9UNX9 436 aa18.51■□□□□ 0.55
CLIC4-203ENST00000489758 PFASO15067 1338 aa18.5■□□□□ 0.55
CLIC4-203ENST00000489758 CCDC85CA6NKD9 419 aa18.5■□□□□ 0.55
CLIC4-203ENST00000489758 COBLO75128 1261 aa18.5■□□□□ 0.55
CLIC4-203ENST00000489758 ADCY7P51828 1080 aa18.5■□□□□ 0.55
CLIC4-203ENST00000489758 SAMD3Q8N6K7 520 aa18.5■□□□□ 0.55
CLIC4-203ENST00000489758 SYTL5Q8TDW5 730 aaPredicted RBP18.5■□□□□ 0.55
CLIC4-203ENST00000489758 CWC22Q9HCG8 908 aaKnown RBP18.5■□□□□ 0.55
CLIC4-203ENST00000489758 MAP3K20Q9NYL2 800 aaKnown RBP18.5■□□□□ 0.55
CLIC4-203ENST00000489758 COL20A1Q9P218 1284 aa18.5■□□□□ 0.55
CLIC4-203ENST00000489758 IVNS1ABPQ9Y6Y0 642 aa18.5■□□□□ 0.55
CLIC4-203ENST00000489758 GCOM1H8Y6P7 765 aaPredicted RBP18.49■□□□□ 0.55
CLIC4-203ENST00000489758 CFBP00751 764 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 PGK2P07205 417 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 POLR2MP0CAP2 368 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 HOXA13P31271 388 aaPredicted RBP18.49■□□□□ 0.55
CLIC4-203ENST00000489758 CLK2P49760 499 aaKnown RBP18.49■□□□□ 0.55
CLIC4-203ENST00000489758 MRPL12P52815 198 aaKnown RBP18.49■□□□□ 0.55
CLIC4-203ENST00000489758 FOSBP53539 338 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 NLRP5P59047 1200 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 UBE2SQ16763 222 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 KRT40Q6A162 431 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 USP17L6PQ6QN14 398 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 TEX2Q8IWB9 1127 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 FAM133AQ8N9E0 248 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 DAGLBQ8NCG7 672 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 SOCS4Q8WXH5 440 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 CUL5Q93034 780 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 C8orf76Q96K31 380 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 FGD4Q96M96 766 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 PURBQ96QR8 312 aaKnown RBP18.49■□□□□ 0.55
CLIC4-203ENST00000489758 C6orf50Q9HD87 102 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 GABRQQ9UN88 632 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 ASTN1O14525 1302 aa18.49■□□□□ 0.55
CLIC4-203ENST00000489758 M0R2N6 131 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 GNRH1P01148 92 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 HSP90AA1P07900 732 aaKnown RBP18.48■□□□□ 0.55
CLIC4-203ENST00000489758 HOXC6P09630 235 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 XBP1P17861 261 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 CALML3P27482 149 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 GNA11P29992 359 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 PRKCZQ05513 592 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 MAP2K5Q13163 448 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 ZNF792Q3KQV3 632 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 SPRYD3Q8NCJ5 442 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 FBXO18Q8NFZ0 1043 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 NUDT12Q9BQG2 462 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 PCDHA4Q9UN74 947 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 KIF3AQ9Y496 699 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 ZSWIM8A7E2V4 1837 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 ZNF236Q9UL36 1845 aa18.48■□□□□ 0.55
CLIC4-203ENST00000489758 BAZ2BQ9UIF8 2168 aaKnown RBP18.48■□□□□ 0.55
CLIC4-203ENST00000489758 SOWAHBA6NEL2 793 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 MMP1P03956 469 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 GUCY1B3Q02153 619 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 CNTN2Q02246 1040 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 GALNT17Q6IS24 598 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 BLIDQ8IZY5 108 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 GLT8D2Q9H1C3 349 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 TMEM260Q9NX78 707 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 SRRDQ9UH36 339 aa18.47■□□□□ 0.55
CLIC4-203ENST00000489758 POTEB2H3BUK9 544 aa18.46■□□□□ 0.55
CLIC4-203ENST00000489758 FLT3LGP49771 235 aa18.46■□□□□ 0.55
CLIC4-203ENST00000489758 TRIM29Q14134 588 aa18.46■□□□□ 0.55
CLIC4-203ENST00000489758 OTOP1Q7RTM1 612 aa18.46■□□□□ 0.55
CLIC4-203ENST00000489758 NPLOC4Q8TAT6 608 aa18.46■□□□□ 0.55
CLIC4-203ENST00000489758 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
CLIC4-203ENST00000489758 TAAR1Q96RJ0 339 aa18.46■□□□□ 0.55
CLIC4-203ENST00000489758 DIS3Q9Y2L1 958 aaKnown RBP18.46■□□□□ 0.55
CLIC4-203ENST00000489758 FRMPD4Q14CM0 1322 aa18.46■□□□□ 0.55
CLIC4-203ENST00000489758 IGHA2P01877 340 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 HOXD10P28358 340 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 RGS2P41220 211 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 ARHGEF6Q15052 776 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 LARP1BQ659C4 914 aaKnown RBP18.45■□□□□ 0.54
CLIC4-203ENST00000489758 DPP9Q86TI2 863 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 FCHSD1Q86WN1 690 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 REXO1Q8N1G1 1221 aaKnown RBP18.45■□□□□ 0.54
CLIC4-203ENST00000489758 BICD2Q8TD16 824 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 RASGRP4Q8TDF6 673 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 TNFRSF25Q93038 417 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 APBA2Q99767 749 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 MCOLN1Q9GZU1 580 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 BIN2Q9UBW5 565 aaPredicted RBP18.45■□□□□ 0.54
CLIC4-203ENST00000489758 PCDHA6Q9UN73 950 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 PCDHA8Q9Y5H6 950 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 RPTORQ8N122 1335 aa18.45■□□□□ 0.54
CLIC4-203ENST00000489758 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
CLIC4-203ENST00000489758 SYT1P21579 422 aa18.44■□□□□ 0.54
CLIC4-203ENST00000489758 KRT2P35908 639 aa18.44■□□□□ 0.54
CLIC4-203ENST00000489758 IRF5Q13568 498 aa18.44■□□□□ 0.54
CLIC4-203ENST00000489758 ZNF467Q7Z7K2 595 aaPredicted RBP18.44■□□□□ 0.54
CLIC4-203ENST00000489758 DIS3L2Q8IYB7 885 aaKnown RBP18.44■□□□□ 0.54
CLIC4-203ENST00000489758 DNERQ8NFT8 737 aa18.44■□□□□ 0.54
CLIC4-203ENST00000489758 MAML3Q96JK9 1138 aa18.44■□□□□ 0.54
CLIC4-203ENST00000489758 TRIM17Q9Y577 477 aa18.44■□□□□ 0.54
CLIC4-203ENST00000489758 BTBD18B2RXH4 712 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms