RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 PDLIM7Q9NR12 457 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 TMEM39AQ9NV64 488 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 ZSWIM5Q9P217 1185 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
GGPS1-207ENST00000489692 TNKSO95271 1327 aa13.66□□□□□ -0.22
GGPS1-207ENST00000489692 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-207ENST00000489692 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-207ENST00000489692 ASGR1P07306 291 aa13.66□□□□□ -0.22
GGPS1-207ENST00000489692 PARP1P09874 1014 aaKnown RBP13.66□□□□□ -0.22
GGPS1-207ENST00000489692 RAG1P15918 1043 aa13.66□□□□□ -0.22
GGPS1-207ENST00000489692 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-207ENST00000489692 BEX3Q00994 111 aa13.66□□□□□ -0.22
GGPS1-207ENST00000489692 SLC30A10Q6XR72 485 aa13.66□□□□□ -0.22
GGPS1-207ENST00000489692 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
GGPS1-207ENST00000489692 RALYLQ86SE5 291 aaKnown RBP13.66□□□□□ -0.22
GGPS1-207ENST00000489692 ENAHQ8N8S7 591 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-207ENST00000489692 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-207ENST00000489692 ERICH2A1L162 156 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 TRIM43BA6NCK2 446 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 ADCY6O43306 1168 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 TRAK2O60296 914 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 ZEB2O60315 1214 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 GJA9P57773 515 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 PDE4DQ08499 809 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 SNX17Q15036 470 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 CDC37Q16543 378 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-207ENST00000489692 ASPRV1Q53RT3 343 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 TLK2Q86UE8 772 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 KLHDC9Q8NEP7 349 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 TRIM43Q96BQ3 446 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-207ENST00000489692 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
GGPS1-207ENST00000489692 A0A0U1RQG5 324 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-207ENST00000489692 B4DLN1 442 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 SNHG28P0DPA3 235 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 ALDH5A1P51649 535 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-207ENST00000489692 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
GGPS1-207ENST00000489692 FSCN1Q16658 493 aaKnown RBP13.64□□□□□ -0.23
GGPS1-207ENST00000489692 LRIT3Q3SXY7 679 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 C1orf53Q5VUE5 145 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 DEFB123Q8N688 67 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 RANBP2P49792 3224 aaKnown RBP13.64□□□□□ -0.23
GGPS1-207ENST00000489692 WDR19Q8NEZ3 1342 aa13.64□□□□□ -0.23
GGPS1-207ENST00000489692 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
GGPS1-207ENST00000489692 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
GGPS1-207ENST00000489692 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
GGPS1-207ENST00000489692 SMPD1P17405 629 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 CST5P28325 142 aaPredicted RBP13.63□□□□□ -0.23
GGPS1-207ENST00000489692 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
GGPS1-207ENST00000489692 PTH1RQ03431 593 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
GGPS1-207ENST00000489692 NECTIN1Q15223 517 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 CXCL17Q6UXB2 119 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 CLEC4DQ8WXI8 215 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 MAP4K1Q92918 833 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 WDR11Q9BZH6 1224 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 KATNBL1Q9H079 304 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 UPF3AQ9H1J1 476 aaKnown RBP13.63□□□□□ -0.23
GGPS1-207ENST00000489692 ASTN1O14525 1302 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 ELP1O95163 1332 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
GGPS1-207ENST00000489692 ARVCFO00192 962 aa13.62□□□□□ -0.23
GGPS1-207ENST00000489692 PTGS1P23219 599 aa13.62□□□□□ -0.23
GGPS1-207ENST00000489692 SHHQ15465 462 aa13.62□□□□□ -0.23
GGPS1-207ENST00000489692 L1TD1Q5T7N2 865 aaKnown RBP13.62□□□□□ -0.23
GGPS1-207ENST00000489692 CCSAPQ6IQ19 270 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-207ENST00000489692 Q7L0L9 218 aa13.62□□□□□ -0.23
GGPS1-207ENST00000489692 CYB5R4Q7L1T6 521 aa13.62□□□□□ -0.23
GGPS1-207ENST00000489692 FBXO11Q86XK2 927 aa13.62□□□□□ -0.23
GGPS1-207ENST00000489692 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
GGPS1-207ENST00000489692 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-207ENST00000489692 COL11A1P12107 1806 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-207ENST00000489692 ABCB11O95342 1321 aa13.62□□□□□ -0.23
GGPS1-207ENST00000489692 MYH4Q9Y623 1939 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 KLRF2D3W0D1 207 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 CABYRO75952 493 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 MYL3P08590 195 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 CYP21A2P08686 494 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 FPGSQ05932 587 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 FAAP100Q0VG06 881 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 WTAPQ15007 396 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 PPP2R5BQ15173 497 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 QRICH1Q2TAL8 776 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 TSGA10IPQ3SY00 556 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 BRDTQ58F21 947 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-207ENST00000489692 C9orf50Q5SZB4 431 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 RNF20Q5VTR2 975 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 TAPT1Q6NXT6 567 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 ANKRD33Q7Z3H0 272 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 MCF2L2Q86YR7 1114 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 OR6J1Q8NGC5 347 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 NCOA7Q8NI08 942 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 TOX2Q96NM4 488 aa13.61□□□□□ -0.23
GGPS1-207ENST00000489692 PPP1R12CQ9BZL4 782 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms