RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 TUBB2AQ13885 445 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 CALCRLQ16602 461 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 APOBEC3HQ6NTF7 200 aaKnown RBP16.78■□□□□ 0.28
COL9A1-208ENST00000489611 CUL5Q93034 780 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 MKL1Q969V6 931 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 MTMR8Q96EF0 704 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 PSMD1Q99460 953 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 TUBB2BQ9BVA1 445 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 IDI2Q9BXS1 227 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 EXOC1Q9NV70 894 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 PVALEFA0A1B0GWK0 134 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 YDJCA8MPS7 323 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 ZBTB5O15062 677 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 SCNN1DP51172 638 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 GRIPAP1Q4V328 841 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 FOXR2Q6PJQ5 311 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 ZNF397Q8NF99 534 aaPredicted RBP16.77■□□□□ 0.28
COL9A1-208ENST00000489611 UBA5Q9GZZ9 404 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 NYAP2Q9P242 653 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 PI4KBQ9UBF8 816 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
COL9A1-208ENST00000489611 LRWD1Q9UFC0 647 aa16.77■□□□□ 0.28
COL9A1-208ENST00000489611 CASQ1P31415 396 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 DACT2Q5SW24 774 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 SV2BQ7L1I2 683 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 RASGRP2Q7LDG7 609 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 ADGRF4Q8IZF3 695 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 RETREG2Q8NC44 543 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 NLGN2Q8NFZ4 835 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 DCAF4Q8WV16 495 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 KANSL2Q9H9L4 492 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 JMJD4Q9H9V9 463 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 BCS1LQ9Y276 419 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 GDAQ9Y2T3 454 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 PP2D1A8MPX8 630 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 LGALS16A8MUM7 142 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 GYPCP04921 128 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 CCNE1P24864 410 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 TECP42680 631 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
COL9A1-208ENST00000489611 DNM2P50570 870 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 TUBB4BP68371 445 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 SEPT2Q15019 361 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 JAKMIP3Q5VZ66 844 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
COL9A1-208ENST00000489611 CDK5RAP3Q96JB5 506 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 CPVLQ9H3G5 476 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 SERPINA10Q9UK55 444 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 SYNPO2Q9UMS6 1093 aa16.76■□□□□ 0.27
COL9A1-208ENST00000489611 FRMPD2Q68DX3 1309 aaPredicted RBP16.76■□□□□ 0.27
COL9A1-208ENST00000489611 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
COL9A1-208ENST00000489611 FGFR1OPO95684 399 aaKnown RBP16.75■□□□□ 0.27
COL9A1-208ENST00000489611 CASP14P31944 242 aa16.75■□□□□ 0.27
COL9A1-208ENST00000489611 CCT6AP40227 531 aaKnown RBP16.75■□□□□ 0.27
COL9A1-208ENST00000489611 KRT79Q5XKE5 535 aa16.75■□□□□ 0.27
COL9A1-208ENST00000489611 KIAA0825Q8IV33 1275 aa16.75■□□□□ 0.27
COL9A1-208ENST00000489611 LARGE2Q8N3Y3 721 aa16.75■□□□□ 0.27
COL9A1-208ENST00000489611 NUP58Q9BVL2 599 aa16.75■□□□□ 0.27
COL9A1-208ENST00000489611 MYO1AQ9UBC5 1043 aa16.75■□□□□ 0.27
COL9A1-208ENST00000489611 EFCAB8A8MWE9 144 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 UBXN1Q04323 297 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 PDE4DQ08499 809 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 GOLGA8FQ08AF8 430 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 GOLGA8DPQ0D2H9 430 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 PSMD2Q13200 908 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 TSR1Q2NL82 804 aaKnown RBP16.74■□□□□ 0.27
COL9A1-208ENST00000489611 TTI2Q6NXR4 508 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 TOGARAM2Q6ZUX3 1019 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 P2RX5Q93086 422 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 VPS16Q9H269 839 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 SPON1Q9HCB6 807 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 ABHD10Q9NUJ1 306 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 ADGRG1Q9Y653 693 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 GNG11P61952 73 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 ASIC1P78348 528 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 NUP88Q99567 741 aaPredicted RBP16.74■□□□□ 0.27
COL9A1-208ENST00000489611 TRIM34Q9BYJ4 488 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 GPCPD1Q9NPB8 672 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 ABCB11O95342 1321 aa16.74■□□□□ 0.27
COL9A1-208ENST00000489611 COL4A5P29400 1685 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 SCN9AQ15858 1988 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 MPHOSPH10O00566 681 aaKnown RBP16.73■□□□□ 0.27
COL9A1-208ENST00000489611 KIF5CO60282 957 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 URI1O94763 535 aaPredicted RBP16.73■□□□□ 0.27
COL9A1-208ENST00000489611 TXKP42681 527 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 MOXD1Q6UVY6 613 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 UNC13DQ70J99 1090 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 IRF2BP1Q8IU81 584 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 CSGALNACT2Q8N6G5 542 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 MB21D1Q8N884 522 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 COA7Q96BR5 231 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
COL9A1-208ENST00000489611 NT5C3AQ9H0P0 336 aa16.73■□□□□ 0.27
COL9A1-208ENST00000489611 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms