RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 COPS6Q7L5N1 327 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 KIAA0825Q8IV33 1275 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 GOLM1Q8NBJ4 401 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 XAGE3Q8WTP9 111 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 GCC1Q96CN9 775 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 CCDC86Q9H6F5 360 aaKnown RBP10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 PCDHA4Q9UN74 947 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 PCDHB5Q9Y5E4 795 aa10.15□□□□□ -0.78
TRAPPC12-221ENST00000489032 CARMIL3Q8ND23 1372 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 AOC2O75106 756 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 CT47B1P0C2W7 299 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 RACK1P63244 317 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 PROSER3Q2NL68 480 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 TTLL7Q6ZT98 887 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 CCDC84Q86UT8 332 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 TMEM130Q8N3G9 435 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 GPBAR1Q8TDU6 330 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 ZNF296Q8WUU4 475 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 RHOVQ96L33 236 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 AKTIPQ9H8T0 292 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 INPP5FQ9Y2H2 1132 aa10.14□□□□□ -0.79
TRAPPC12-221ENST00000489032 RNF123Q5XPI4 1314 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 TRPM7Q96QT4 1865 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 TCERG1O14776 1098 aaKnown RBP10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 SART1O43290 800 aaKnown RBP10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 WISP1O95388 367 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 SELPP16109 830 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 SEPT6Q14141 434 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 RASIP1Q5U651 963 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 TRMT2AQ8IZ69 625 aaKnown RBP10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 C12orf50Q8NA57 414 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 BRIP1Q9BX63 1249 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 NIP7Q9Y221 180 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 CACNA1SQ13698 1873 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 ANKRD31Q8N7Z5 1873 aa10.13□□□□□ -0.79
TRAPPC12-221ENST00000489032 SLX4Q8IY92 1834 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 ZNF541Q9H0D2 1346 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 MEGF11A6BM72 1044 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 CTSBP07858 339 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 RAD51AP2Q09MP3 1159 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 KIAA1211Q6ZU35 1233 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 LRP10Q7Z4F1 713 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 PLBD2Q8NHP8 589 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 ELMO3Q96BJ8 720 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 CEP41Q9BYV8 373 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 NYXQ9GZU5 481 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 ACBD3Q9H3P7 528 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 CAPN10Q9HC96 672 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 PICK1Q9NRD5 415 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 SCN7AQ01118 1682 aa10.12□□□□□ -0.79
TRAPPC12-221ENST00000489032 COL11A2P13942 1736 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 GLB1P16278 677 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 ST5P78524 1137 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 HLFQ16534 295 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 ANKRD34AQ69YU3 496 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 FBXL19Q6PCT2 694 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 NBPF5PQ86XG9 351 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 VPS37DQ86XT2 251 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 AGGF1Q8N302 714 aaeCLIP10.11□□□□□ -0.791e-8■□□□□ 9.3
TRAPPC12-221ENST00000489032 GATAD2BQ8WXI9 593 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 TMPRSS13Q9BYE2 586 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 PHAXQ9H814 394 aaKnown RBP10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 ADAMTS1Q9UHI8 967 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 BCORQ6W2J9 1755 aa10.11□□□□□ -0.79
TRAPPC12-221ENST00000489032 ZNF862O60290 1169 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 DLGAP3O95886 979 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 GPTP24298 496 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 KIF4BQ2VIQ3 1234 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 ALDH1L2Q3SY69 923 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 CCDC93Q567U6 631 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 CST9Q5W186 159 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 STYK1Q6J9G0 422 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 KSR2Q6VAB6 950 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 HDXQ7Z353 690 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 GPC2Q8N158 579 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 CNBD1Q8NA66 436 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 WDR18Q9BV38 432 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 SMC4Q9NTJ3 1288 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 AP4E1Q9UPM8 1137 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 ARFGEF2Q9Y6D5 1785 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 CACNA1FO60840 1977 aa10.1□□□□□ -0.79
TRAPPC12-221ENST00000489032 ALX3O95076 343 aa10.09□□□□□ -0.79
TRAPPC12-221ENST00000489032 TCIRG1Q13488 830 aa10.09□□□□□ -0.79
TRAPPC12-221ENST00000489032 CIAPIN1Q6FI81 312 aa10.09□□□□□ -0.79
TRAPPC12-221ENST00000489032 BNC2Q6ZN30 1099 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-221ENST00000489032 SMG8Q8ND04 991 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-221ENST00000489032 WDR89Q96FK6 387 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-221ENST00000489032 MASTLQ96GX5 879 aa10.09□□□□□ -0.79
TRAPPC12-221ENST00000489032 HHIPL1Q96JK4 782 aa10.09□□□□□ -0.79
TRAPPC12-221ENST00000489032 PI4KAP2A4QPH2 592 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 FZD9O00144 591 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 F13A1P00488 732 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 SRGNP10124 158 aa10.08□□□□□ -0.8
TRAPPC12-221ENST00000489032 IREB2P48200 963 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms