RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 TDP2O95551 362 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 MCM6Q14566 821 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 VPS72Q15906 364 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 ZYXQ15942 572 aaKnown RBP8.54□□□□□ -1.04
BEST3-205ENST00000488961 PFKFB3Q16875 520 aaPredicted RBP8.54□□□□□ -1.04
BEST3-205ENST00000488961 TMEM139Q8IV31 216 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 CERS5Q8N5B7 392 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 TNFRSF25Q93038 417 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 GJD4Q96KN9 370 aaPredicted RBP8.54□□□□□ -1.04
BEST3-205ENST00000488961 PSMB7Q99436 277 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 NUDT12Q9BQG2 462 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 RTFDC1Q9BY42 306 aaPredicted RBP8.54□□□□□ -1.04
BEST3-205ENST00000488961 ZHX3Q9H4I2 956 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 SLC39A2Q9NP94 309 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 GGA1Q9UJY5 639 aa8.54□□□□□ -1.04
BEST3-205ENST00000488961 TTF2Q9UNY4 1162 aaKnown RBP8.54□□□□□ -1.04
BEST3-205ENST00000488961 FLT1P17948 1338 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 MYH10P35580 1976 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 PHACTR2O75167 634 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 RPS6KA5O75582 802 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 AP1G2O75843 785 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 IDEP14735 1019 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 KRT31Q15323 416 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 TXNRD1Q16881 649 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 CCDC12Q8WUD4 166 aaPredicted RBP8.53□□□□□ -1.04
BEST3-205ENST00000488961 ANKRD2Q9GZV1 360 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 QTRT2Q9H974 415 aaKnown RBP8.53□□□□□ -1.04
BEST3-205ENST00000488961 ARFGAP3Q9NP61 516 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 ANAPC4Q9UJX5 808 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 NEMFO60524 1076 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 SKAP2O75563 359 aaPredicted RBP8.53□□□□□ -1.04
BEST3-205ENST00000488961 PLCG1P19174 1290 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 CHRNA5P30532 468 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 UBA7P41226 1012 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 GSDMDP57764 484 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 UBXN2AP68543 259 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 CCDC96Q2M329 555 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 USH1GQ495M9 461 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 SPECC1LQ69YQ0 1117 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 ZNF804AQ7Z570 1209 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 KIRREL3Q8IZU9 778 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 TBC1D16Q8TBP0 767 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 CD248Q9HCU0 757 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 ATP8A2Q9NTI2 1148 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
BEST3-205ENST00000488961 MKRN1Q9UHC7 482 aaKnown RBP8.53□□□□□ -1.04
BEST3-205ENST00000488961 CEP131Q9UPN4 1083 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 BCS1LQ9Y276 419 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 ARAP2Q8WZ64 1704 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 LRP5O75197 1615 aa8.53□□□□□ -1.04
BEST3-205ENST00000488961 ADAMTSL1Q8N6G6 1762 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 NPHP3-ACAD11A0A0J9YXS1 232 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L15C9J2P7 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L13C9JLJ4 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L11C9JVI0 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L18D6R9N7 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L22D6RA61 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L17D6RBQ6 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L19D6RCP7 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L20D6RJB6 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 IKBKBO14920 756 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 SLC37A4O43826 429 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 SARSP49591 514 aaKnown RBP8.52□□□□□ -1.04
BEST3-205ENST00000488961 IRX1P78414 480 aaPredicted RBP8.52□□□□□ -1.04
BEST3-205ENST00000488961 UBXN1Q04323 297 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L24Q0WX57 530 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 TRIM65Q6PJ69 517 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 USP17L6PQ6QN14 398 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 TBCKQ8TEA7 893 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 SUGCTQ9HAC7 445 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 VEZTQ9HBM0 779 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 ETAA1Q9NY74 926 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 HDAC6Q9UBN7 1215 aa8.52□□□□□ -1.04
BEST3-205ENST00000488961 NRAPQ86VF7 1730 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 CCDC88AQ3V6T2 1871 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 B4DLN1 442 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 RPN1P04843 607 aaKnown RBP8.52□□□□□ -1.05
BEST3-205ENST00000488961 ATP2C1P98194 919 aaPredicted RBP8.52□□□□□ -1.05
BEST3-205ENST00000488961 IKQ13123 557 aaPredicted RBP8.52□□□□□ -1.05
BEST3-205ENST00000488961 TBC1D10BQ4KMP7 808 aaPredicted RBP8.52□□□□□ -1.05
BEST3-205ENST00000488961 NAALADL2Q58DX5 795 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 SLC10A5Q5PT55 438 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 AP1ARQ63HQ0 302 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 PPFIBP1Q86W92 1011 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 PROM2Q8N271 834 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 CCDC150Q8NCX0 1101 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 TATDN2Q93075 761 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 WNK3Q9BYP7 1800 aa8.52□□□□□ -1.05
BEST3-205ENST00000488961 STXBP3O00186 592 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 SRGAP2O75044 1071 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 ZMYND10O75800 440 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 BAG3O95817 575 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 GYPCP04921 128 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 STAT3P40763 770 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 CYP27A1Q02318 531 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 NEDD9Q14511 834 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 LONRF2Q1L5Z9 754 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 PDXDC2PQ6P474 469 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 DTHD1Q6ZMT9 781 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 CAPZA3Q96KX2 299 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms