RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 PEX10O60683 326 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 TSPAN15O95858 294 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 KRT1P04264 644 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 GRIA2P42262 883 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 DLG4P78352 724 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 MBLAC2Q68D91 279 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 RPTNQ6XPR3 784 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 ANKLE2Q86XL3 938 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 LZTR1Q8N653 840 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 FRS2Q8WU20 508 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 HCFC2Q9Y5Z7 792 aa7.43□□□□□ -1.22
VPS8-224ENST00000488255 TRBV23OR9-2A0A075B6M9 112 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 A0A1W2PQU0 124 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 ZC3H12DA2A288 527 aaKnown RBP7.42□□□□□ -1.22
VPS8-224ENST00000488255 F8W031 263 aaPredicted RBP7.42□□□□□ -1.22
VPS8-224ENST00000488255 PPP1R11O60927 126 aaPredicted RBP7.42□□□□□ -1.22
VPS8-224ENST00000488255 FUCA1P04066 466 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 DBHP09172 617 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 HOXC12P31275 282 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 PPP2R2AP63151 447 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 CYP4F3Q08477 520 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 INF2Q27J81 1249 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 OLFML2BQ68BL8 750 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 MARCH2Q9P0N8 246 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 FBLN5Q9UBX5 448 aa7.42□□□□□ -1.22
VPS8-224ENST00000488255 TMEFF2Q9UIK5 374 aaPredicted RBP7.42□□□□□ -1.22
VPS8-224ENST00000488255 SMG5Q9UPR3 1016 aaKnown RBP7.42□□□□□ -1.22
VPS8-224ENST00000488255 DBX1A6NMT0 343 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 ABLIM1O14639 778 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 SEMA7AO75326 666 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 GLDCP23378 1020 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 EPHB3P54753 998 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 NCKAP1LP55160 1127 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 CORO7P57737 925 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 YBX1P67809 324 aaKnown RBP7.41□□□□□ -1.22
VPS8-224ENST00000488255 TMEM62Q0P6H9 643 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 TMEM145Q8NBT3 493 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 EPN3Q9H201 632 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 GCM1Q9NP62 436 aa7.41□□□□□ -1.22
VPS8-224ENST00000488255 MBD1Q9UIS9 605 aaPredicted RBP7.41□□□□□ -1.22
VPS8-224ENST00000488255 MEFVO15553 781 aaPredicted RBP7.4□□□□□ -1.22
VPS8-224ENST00000488255 CYBBP04839 570 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 NR1I3Q14994 352 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 KCNA10Q16322 511 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 PLEKHN1Q494U1 663 aaPredicted RBP7.4□□□□□ -1.22
VPS8-224ENST00000488255 PAQR3Q6TCH7 311 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 NPM2Q86SE8 214 aaKnown RBP7.4□□□□□ -1.22
VPS8-224ENST00000488255 CABP7Q86V35 215 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 TEX2Q8IWB9 1127 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 PPIL6Q8IXY8 311 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 BHLHE22Q8NFJ8 381 aaPredicted RBP7.4□□□□□ -1.22
VPS8-224ENST00000488255 NLGN2Q8NFZ4 835 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 NPLOC4Q8TAT6 608 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 DIO2Q92813 273 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 MMP19Q99542 508 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 IER2Q9BTL4 223 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 BCAS3Q9H6U6 928 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 CNTD2Q9H8S5 307 aa7.4□□□□□ -1.22
VPS8-224ENST00000488255 GFRA1P56159 465 aa7.39□□□□□ -1.23
VPS8-224ENST00000488255 ZNF200P98182 395 aaPredicted RBP7.39□□□□□ -1.23
VPS8-224ENST00000488255 ZC3H14Q6PJT7 736 aaKnown RBP7.39□□□□□ -1.23
VPS8-224ENST00000488255 CCDC103Q8IW40 242 aa7.39□□□□□ -1.23
VPS8-224ENST00000488255 PMFBP1Q8TBY8 1022 aa7.39□□□□□ -1.23
VPS8-224ENST00000488255 CHAMP1Q96JM3 812 aa7.39□□□□□ -1.23
VPS8-224ENST00000488255 PFDN2Q9UHV9 154 aa7.39□□□□□ -1.23
VPS8-224ENST00000488255 ARNTLO00327 626 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 CPP00450 1065 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 MED14OSP0DP75 135 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 MAPKAPK2P49137 400 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 CDR1P51861 262 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 PRR5P85299 388 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 HSP90AA2PQ14568 343 aaPredicted RBP7.38□□□□□ -1.23
VPS8-224ENST00000488255 KREMEN2Q8NCW0 462 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 DPF3Q92784 378 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 CCDC140Q96MF4 163 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 MTA3Q9BTC8 594 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 HIRIP3Q9BW71 556 aaPredicted RBP7.38□□□□□ -1.23
VPS8-224ENST00000488255 CD320Q9NPF0 282 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 CNOT6Q9ULM6 557 aaKnown RBP7.38□□□□□ -1.23
VPS8-224ENST00000488255 PLA2G2DQ9UNK4 145 aa7.38□□□□□ -1.23
VPS8-224ENST00000488255 IQCA1LA6NCM1 817 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 HRKO00198 91 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 PDPK1O15530 556 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 PRODHO43272 600 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 SRGAP3O43295 1099 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 NTRK1P04629 796 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 GLI4P10075 376 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 LCP1P13796 627 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 BCL6P41182 706 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 LINC00310P59036 64 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 SSPNQ14714 243 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 CBX2Q14781 532 aaPredicted RBP7.37□□□□□ -1.23
VPS8-224ENST00000488255 MTERF2Q49AM1 385 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 LCE3BQ5TA77 95 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 IQCEQ6IPM2 695 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 DENND5AQ6IQ26 1287 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 SPATC1Q76KD6 591 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 LDHDQ86WU2 507 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 LRRC56Q8IYG6 542 aaPredicted RBP7.37□□□□□ -1.23
VPS8-224ENST00000488255 KCTD13Q8WZ19 329 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms