RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 MTMR6Q9Y217 621 aa15.91■□□□□ 0.14
NELFCD-209ENST00000486263 RIPK3Q9Y572 518 aa15.91■□□□□ 0.14
NELFCD-209ENST00000486263 ERCC3P19447 782 aa15.9■□□□□ 0.14
NELFCD-209ENST00000486263 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
NELFCD-209ENST00000486263 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
NELFCD-209ENST00000486263 TEX2Q8IWB9 1127 aa15.9■□□□□ 0.14
NELFCD-209ENST00000486263 ANKRD35Q8N283 1001 aa15.9■□□□□ 0.14
NELFCD-209ENST00000486263 SAMD3Q8N6K7 520 aa15.9■□□□□ 0.14
NELFCD-209ENST00000486263 DAGLBQ8NCG7 672 aa15.9■□□□□ 0.14
NELFCD-209ENST00000486263 SHCBP1Q8NEM2 672 aa15.9■□□□□ 0.14
NELFCD-209ENST00000486263 FOXP1Q9H334 677 aaPredicted RBP15.9■□□□□ 0.14
NELFCD-209ENST00000486263 ZSCAN16Q9H4T2 348 aaPredicted RBP15.9■□□□□ 0.14
NELFCD-209ENST00000486263 BIN2Q9UBW5 565 aaPredicted RBP15.9■□□□□ 0.14
NELFCD-209ENST00000486263 CCDC194A0A1B0GVG4 234 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 SPDYE3A6NKU9 549 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 BTBD18B2RXH4 712 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 NFIBO00712 420 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 ARHGEF6Q15052 776 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 UBE2SQ16763 222 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 JAKMIP3Q5VZ66 844 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 USP17L6PQ6QN14 398 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 C17orf99Q6UX52 265 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 RNF207Q6ZRF8 634 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 FERMT3Q86UX7 667 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 CLEC4DQ8WXI8 215 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 SHISA4Q96DD7 197 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 MAF1Q9H063 256 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 EHMT1Q9H9B1 1298 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 MAP3K20Q9NYL2 800 aaKnown RBP15.89■□□□□ 0.13
NELFCD-209ENST00000486263 IVNS1ABPQ9Y6Y0 642 aa15.89■□□□□ 0.13
NELFCD-209ENST00000486263 COL11A1P12107 1806 aaPredicted RBP15.89■□□□□ 0.13
NELFCD-209ENST00000486263 BRD1O95696 1058 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 BCRP11274 1271 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 FCER1AP12319 257 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 MAPK4P31152 587 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 HOXA13P31271 388 aaPredicted RBP15.88■□□□□ 0.13
NELFCD-209ENST00000486263 DDIT3P35638 169 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 NR5A1Q13285 461 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 PKP1Q13835 747 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 KCTD2Q14681 263 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 KRT25Q7Z3Z0 450 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 OXER1Q8TDS5 423 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 MMP19Q99542 508 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 EFCC1Q9HA90 598 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 ATP6V1DQ9Y5K8 247 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 A0A0G2JMZ2 1700 aa15.88■□□□□ 0.13
NELFCD-209ENST00000486263 PIK3CDO00329 1044 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 F13A1P00488 732 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 FOSP01100 380 aaPredicted RBP15.87■□□□□ 0.13
NELFCD-209ENST00000486263 AP3B2Q13367 1082 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 BAATQ14032 418 aaPredicted RBP15.87■□□□□ 0.13
NELFCD-209ENST00000486263 FBXO46Q6PJ61 603 aaPredicted RBP15.87■□□□□ 0.13
NELFCD-209ENST00000486263 BRAPQ7Z569 592 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 NOSTRINQ8IVI9 506 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 RASGRP4Q8TDF6 673 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 TBC1D5Q92609 795 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 PORCNQ9H237 461 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 NOL7Q9UMY1 257 aaKnown RBP15.87■□□□□ 0.13
NELFCD-209ENST00000486263 PCDHA6Q9UN73 950 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 PCDHA8Q9Y5H6 950 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 PFASO15067 1338 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 ADGRA2Q96PE1 1338 aa15.87■□□□□ 0.13
NELFCD-209ENST00000486263 MEIS2O14770 477 aa15.86■□□□□ 0.13
NELFCD-209ENST00000486263 OPLAHO14841 1288 aa15.86■□□□□ 0.13
NELFCD-209ENST00000486263 ECM2O94769 699 aaPredicted RBP15.86■□□□□ 0.13
NELFCD-209ENST00000486263 U2AF2P26368 475 aaKnown RBP eCLIP15.86■□□□□ 0.132e-13■□□□□ 9.6
NELFCD-209ENST00000486263 HSD17B4P51659 736 aa15.86■□□□□ 0.13
NELFCD-209ENST00000486263 RPS6P62753 249 aaKnown RBP15.86■□□□□ 0.13
NELFCD-209ENST00000486263 KIF22Q14807 665 aa15.86■□□□□ 0.13
NELFCD-209ENST00000486263 NONOQ15233 471 aaKnown RBP eCLIP15.86■□□□□ 0.13
NELFCD-209ENST00000486263 NPY5RQ15761 445 aa15.86■□□□□ 0.13
NELFCD-209ENST00000486263 PIK3AP1Q6ZUJ8 805 aa15.86■□□□□ 0.13
NELFCD-209ENST00000486263 A1CFQ9NQ94 594 aaKnown RBP15.86■□□□□ 0.13
NELFCD-209ENST00000486263 TMEM260Q9NX78 707 aa15.86■□□□□ 0.13
NELFCD-209ENST00000486263 KIF28PB7ZC32 967 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 POTEB2H3BUK9 544 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 STRNO43815 780 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 GNRH1P01148 92 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 CLK2P49760 499 aaKnown RBP15.85■□□□□ 0.13
NELFCD-209ENST00000486263 RESTQ13127 1097 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 SLC30A10Q6XR72 485 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 OTOP1Q7RTM1 612 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 PLEKHH3Q7Z736 793 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 CD99L2Q8TCZ2 262 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 ANO3Q9BYT9 981 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 CYP39A1Q9NYL5 469 aa15.85■□□□□ 0.13
NELFCD-209ENST00000486263 FOXD4L6Q3SYB3 417 aaPredicted RBP15.84■□□□□ 0.13
NELFCD-209ENST00000486263 ARHGEF16Q5VV41 709 aa15.84■□□□□ 0.13
NELFCD-209ENST00000486263 FOXD4L3Q6VB84 417 aaPredicted RBP15.84■□□□□ 0.13
NELFCD-209ENST00000486263 GPR142Q7Z601 462 aa15.84■□□□□ 0.13
NELFCD-209ENST00000486263 SYTL5Q8TDW5 730 aaPredicted RBP15.84■□□□□ 0.13
NELFCD-209ENST00000486263 PGBD1Q96JS3 809 aa15.84■□□□□ 0.13
NELFCD-209ENST00000486263 ZNF396Q96N95 335 aaPredicted RBP15.84■□□□□ 0.13
NELFCD-209ENST00000486263 ZDHHC9Q9Y397 364 aa15.84■□□□□ 0.13
NELFCD-209ENST00000486263 TRIM17Q9Y577 477 aa15.84■□□□□ 0.13
NELFCD-209ENST00000486263 B4DLN1 442 aa15.83■□□□□ 0.12
NELFCD-209ENST00000486263 M0R2N6 131 aa15.83■□□□□ 0.12
NELFCD-209ENST00000486263 TNPO2O14787 897 aaKnown RBP15.83■□□□□ 0.12
NELFCD-209ENST00000486263 ADAMTS3O15072 1205 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms