RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 PHF24Q9UPV7 400 aa21.4■■□□□ 1.02
COL1A1-206ENST00000485870 COLQQ9Y215 455 aaPredicted RBP21.4■■□□□ 1.02
COL1A1-206ENST00000485870 MYADML2A6NDP7 307 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 CYTH3O43739 400 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 C6orf222P0C671 652 aaPredicted RBP21.39■■□□□ 1.01
COL1A1-206ENST00000485870 IRX5P78411 483 aaPredicted RBP21.39■■□□□ 1.01
COL1A1-206ENST00000485870 TNFAIP2Q03169 654 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 ADCK5Q3MIX3 580 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 MCF2L2Q86YR7 1114 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 RAB11FIP4Q86YS3 637 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 PIBF1Q8WXW3 757 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 TCEANC2Q96MN5 208 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 VTA1Q9NP79 307 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 TRIOBPQ9H2D6 2365 aa21.39■■□□□ 1.01
COL1A1-206ENST00000485870 RXRAP19793 462 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 LIFRP42702 1097 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 RTP1P59025 263 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 TAPT1Q6NXT6 567 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 SLC39A5Q6ZMH5 540 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 DNERQ8NFT8 737 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 MAP3K14Q99558 947 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 SPC25Q9HBM1 224 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 PCDH10Q9P2E7 1040 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 ATP11BQ9Y2G3 1177 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 PCDHA1Q9Y5I3 950 aa21.38■■□□□ 1.01
COL1A1-206ENST00000485870 LOC102724159A0A0B4J2E5 919 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 CFBP00751 764 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 PTGS1P23219 599 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 KIF5BP33176 963 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 PDE4DQ08499 809 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 KRT32Q14532 448 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 PWP2Q15269 919 aaKnown RBP21.37■■□□□ 1.01
COL1A1-206ENST00000485870 KCNA10Q16322 511 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 TSGA10IPQ3SY00 556 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 KLHDC9Q8NEP7 349 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 SYTL5Q8TDW5 730 aaPredicted RBP21.37■■□□□ 1.01
COL1A1-206ENST00000485870 MPHOSPH6Q99547 160 aaKnown RBP21.37■■□□□ 1.01
COL1A1-206ENST00000485870 UPF3AQ9H1J1 476 aaKnown RBP21.37■■□□□ 1.01
COL1A1-206ENST00000485870 SLC12A7Q9Y666 1083 aa21.37■■□□□ 1.01
COL1A1-206ENST00000485870 RANBP2P49792 3224 aaKnown RBP21.36■■□□□ 1.01
COL1A1-206ENST00000485870 A0A1W2PQ45 241 aaPredicted RBP21.36■■□□□ 1.01
COL1A1-206ENST00000485870 A0A1W2PQY0 241 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 OPLAHO14841 1288 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 SMPD1P17405 629 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 ACLYP53396 1101 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 GJA9P57773 515 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 TRIM60Q495X7 471 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 HABP4Q5JVS0 413 aaKnown RBP21.36■■□□□ 1.01
COL1A1-206ENST00000485870 TLK2Q86UE8 772 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 TAAR1Q96RJ0 339 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 TSEN34Q9BSV6 310 aaKnown RBP21.36■■□□□ 1.01
COL1A1-206ENST00000485870 COL20A1Q9P218 1284 aa21.36■■□□□ 1.01
COL1A1-206ENST00000485870 PNMA6FA0A0J9YX94 578 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 REC8O95072 547 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 PLEKHA8P1O95397 391 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 CALM1P0DP23 149 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 CALM2P0DP24 149 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 CALM3P0DP25 149 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 EDNRBP24530 442 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 CST5P28325 142 aaPredicted RBP21.35■■□□□ 1.01
COL1A1-206ENST00000485870 EXOSC10Q01780 885 aaKnown RBP21.35■■□□□ 1.01
COL1A1-206ENST00000485870 GNASQ5JWF2 1037 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 TMEM63BQ5T3F8 832 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 IQSEC1Q6DN90 963 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 CCSAPQ6IQ19 270 aaPredicted RBP21.35■■□□□ 1.01
COL1A1-206ENST00000485870 DHX32Q7L7V1 743 aaKnown RBP21.35■■□□□ 1.01
COL1A1-206ENST00000485870 MAF1Q9H063 256 aa21.35■■□□□ 1.01
COL1A1-206ENST00000485870 GNEQ9Y223 722 aaKnown RBP21.35■■□□□ 1.01
COL1A1-206ENST00000485870 MOXD2PA6NHM9 499 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 B4DLN1 442 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 DYNC1LI2O43237 492 aaPredicted RBP21.34■■□□□ 1.01
COL1A1-206ENST00000485870 HSPA4P34932 840 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 MRPL12P52815 198 aaKnown RBP21.34■■□□□ 1.01
COL1A1-206ENST00000485870 BEX3Q00994 111 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 SNX17Q15036 470 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 SGMS1Q86VZ5 419 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 MICU3Q86XE3 530 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 RMDN3Q96TC7 470 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 SPZ1Q9BXG8 430 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 AP5M1Q9H0R1 490 aa21.34■■□□□ 1.01
COL1A1-206ENST00000485870 RBM27Q9P2N5 1060 aaKnown RBP21.34■■□□□ 1.01
COL1A1-206ENST00000485870 CTAGE5O15320 804 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 ASGR1P07306 291 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 CPA1P15085 419 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 GNAQP50148 359 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 HSD17B4P51659 736 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 TRAF1Q13077 416 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 SYNE3Q6ZMZ3 975 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 CMTR1Q8N1G2 835 aaKnown RBP21.33■■□□□ 1.01
COL1A1-206ENST00000485870 SRBD1Q8N5C6 995 aaKnown RBP21.33■■□□□ 1.01
COL1A1-206ENST00000485870 PCSK9Q8NBP7 692 aaKnown RBP21.33■■□□□ 1.01
COL1A1-206ENST00000485870 NSUN6Q8TEA1 469 aaKnown RBP21.33■■□□□ 1.01
COL1A1-206ENST00000485870 KCNB2Q92953 911 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 RRP36Q96EU6 259 aaKnown RBP21.33■■□□□ 1.01
COL1A1-206ENST00000485870 JAKMIP1Q96N16 626 aaKnown RBP21.33■■□□□ 1.01
COL1A1-206ENST00000485870 LZTS2Q9BRK4 669 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 WDR11Q9BZH6 1224 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 STARD7Q9NQZ5 370 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 SNX14Q9Y5W7 946 aa21.33■■□□□ 1.01
COL1A1-206ENST00000485870 HMGB1P09429 215 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms