RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 TLL1O43897 1013 aa18.16■□□□□ 0.5
HLA-DQB1-208ENST00000484729 POU3F3P20264 500 aaPredicted RBP18.16■□□□□ 0.5
HLA-DQB1-208ENST00000484729 PPP1R13LQ8WUF5 828 aa18.16■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ARNTL2Q8WYA1 636 aa18.16■□□□□ 0.5
HLA-DQB1-208ENST00000484729 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
HLA-DQB1-208ENST00000484729 HCN4Q9Y3Q4 1203 aa18.16■□□□□ 0.5
HLA-DQB1-208ENST00000484729 LRRC37A2A6NM11 1700 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 ALAS1P13196 640 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TFAP4Q01664 338 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TMEM31Q5JXX7 168 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 IQSEC1Q6DN90 963 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 GMCL1P1Q8NEA9 526 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 NEDD1Q8NHV4 660 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 SEZ6LQ9BYH1 1024 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 SYNPO2Q9UMS6 1093 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 SCN5AQ14524 2016 aa18.15■□□□□ 0.5
HLA-DQB1-208ENST00000484729 FAM86C2PA6NEL3 165 aa18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 TAP1Q03518 808 aa18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 IKQ13123 557 aaPredicted RBP18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 MUM1L1Q5H9M0 696 aa18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 ANKRD45Q5TZF3 282 aa18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 KIAA1211Q6ZU35 1233 aa18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 SPRED2Q7Z698 418 aa18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 COG5Q9UP83 839 aa18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 TNKSO95271 1327 aa18.14■□□□□ 0.49
HLA-DQB1-208ENST00000484729 STAT2P52630 851 aa18.13■□□□□ 0.49
HLA-DQB1-208ENST00000484729 C11orf16Q9NQ32 467 aa18.13■□□□□ 0.49
HLA-DQB1-208ENST00000484729 CYP39A1Q9NYL5 469 aa18.13■□□□□ 0.49
HLA-DQB1-208ENST00000484729 Q9Y3F1 56 aa18.13■□□□□ 0.49
HLA-DQB1-208ENST00000484729 SALL3Q9BXA9 1300 aa18.13■□□□□ 0.49
HLA-DQB1-208ENST00000484729 TSPY2A6NKD2 308 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 PFKMP08237 780 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 MYL3P08590 195 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 FDX1P10109 184 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 MCCP23508 829 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 CHURC1Q8WUH1 139 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 STAG1Q8WVM7 1258 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 HLA-CQ95604 372 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 STX8Q9UNK0 236 aa18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 ARIH1Q9Y4X5 557 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-208ENST00000484729 FOXP2O15409 715 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 SUPT20HL2P0C7V6 817 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 ACTN1P12814 892 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 CTDSPL2Q05D32 466 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 GRB10Q13322 594 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 TKFCQ3LXA3 575 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 PPP4R3BQ5MIZ7 849 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 NSMFQ6X4W1 530 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 KCTD1Q719H9 257 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 HERC6Q8IVU3 1022 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 EVI5LQ96CN4 794 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 SLC9A7Q96T83 725 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 VTA1Q9NP79 307 aa18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.11■□□□□ 0.49
HLA-DQB1-208ENST00000484729 SLC1A4P43007 532 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 PURAQ00577 322 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 DUSP28Q4G0W2 176 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 FAM47CQ5HY64 1035 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 VPS53Q5VIR6 699 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 RASGRP2Q7LDG7 609 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 GMCL1Q96IK5 515 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 WDR11Q9BZH6 1224 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 FTOQ9C0B1 505 aaKnown RBP eCLIP18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 CD320Q9NPF0 282 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 POLR3EQ9NVU0 708 aa18.1■□□□□ 0.49
HLA-DQB1-208ENST00000484729 RANBP6O60518 1105 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 LPXNO60711 386 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 IQCF3P0C7M6 154 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 PDE1AP54750 535 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 NBPF20Q3BBV1 942 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 PHOSPHO2Q8TCD6 241 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 PRR12Q9ULL5 1215 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 MTMR7Q9Y216 660 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 LCTP09848 1927 aa18.09■□□□□ 0.49
HLA-DQB1-208ENST00000484729 RBAK-RBAKDNI3L0D1 243 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 NMT2O60551 498 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 GPR37L1O60883 481 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 HDAC1Q13547 482 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 TMCO2Q7Z6W1 182 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 OR6J1Q8NGC5 347 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 MORC4Q8TE76 937 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 MTG1Q9BT17 334 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 GPHNQ9NQX3 736 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 TOMM22Q9NS69 142 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 CCPG1Q9ULG6 757 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 PIEZO1Q92508 2521 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 MUC6Q6W4X9 2439 aa18.08■□□□□ 0.48
HLA-DQB1-208ENST00000484729 LCHNA4D1U4 455 aa18.07■□□□□ 0.48
HLA-DQB1-208ENST00000484729 KIF28PB7ZC32 967 aa18.07■□□□□ 0.48
HLA-DQB1-208ENST00000484729 RFC2P35250 354 aa18.07■□□□□ 0.48
HLA-DQB1-208ENST00000484729 BAATQ14032 418 aaPredicted RBP18.07■□□□□ 0.48
HLA-DQB1-208ENST00000484729 RETREG2Q8NC44 543 aa18.07■□□□□ 0.48
HLA-DQB1-208ENST00000484729 IL17RBQ9NRM6 502 aa18.07■□□□□ 0.48
HLA-DQB1-208ENST00000484729 HELLSQ9NRZ9 838 aa18.07■□□□□ 0.48
HLA-DQB1-208ENST00000484729 A0A0D9SFI3 127 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms