RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TMEM47Q9BQJ4 181 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 MTA3Q9BTC8 594 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 SENP2Q9HC62 589 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 RANBP2P49792 3224 aaKnown RBP8.01□□□□□ -1.13
BRCA1-216ENST00000484087 KLF18A0A0U1RQI7 1052 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 GOLGA8BA8MQT2 603 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 CDKL5O76039 1030 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 HMGCRP04035 888 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 FGRP09769 529 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 BMP3P12645 472 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 PTPREP23469 700 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 PDIA3P30101 505 aaKnown RBP8.01□□□□□ -1.13
BRCA1-216ENST00000484087 SLC1A4P43007 532 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 NT5C2P49902 561 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 CACNB2Q08289 660 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-216ENST00000484087 ST3GAL1Q11201 340 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 MAP2K5Q13163 448 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 GRB14Q14449 540 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 PRAMEF19Q5SWL8 479 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 NFXL1Q6ZNB6 911 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 TMTC2Q8N394 836 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 TRPV1Q8NER1 839 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 U2AF1L4Q8WU68 220 aaKnown RBP8.01□□□□□ -1.13
BRCA1-216ENST00000484087 MKL1Q969V6 931 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 SYAP1Q96A49 352 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-216ENST00000484087 LENG1Q96BZ8 264 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-216ENST00000484087 APBA2Q99767 749 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.01□□□□□ -1.13
BRCA1-216ENST00000484087 ZNF287Q9HBT7 754 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 LMBRD1Q9NUN5 540 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 MTMR6Q9Y217 621 aa8.01□□□□□ -1.13
BRCA1-216ENST00000484087 CCDC69A6NI79 296 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 IFIT3O14879 490 aaKnown RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 PTGS1P23219 599 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 RGS2P41220 211 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 UBXN2AP68543 259 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 CCT2P78371 535 aaKnown RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 KRT85P78386 507 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 CCNA1P78396 465 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 ARSIQ5FYB1 569 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 TMEM67Q5HYA8 995 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 NSUN7Q8NE18 718 aaKnown RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 GMCL1P1Q8NEA9 526 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 SMARCC2Q8TAQ2 1214 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 PXYLP1Q8TE99 480 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 SOCS4Q8WXH5 440 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 ESR2Q92731 530 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 AGBL1Q96MI9 1066 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 PURBQ96QR8 312 aaKnown RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 UBAC1Q9BSL1 405 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 GZF1Q9H116 711 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 ZSCAN16Q9H4T2 348 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 GPHNQ9NQX3 736 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 HOXC10Q9NYD6 342 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 ADAMTS5Q9UNA0 930 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 IVNS1ABPQ9Y6Y0 642 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 ZNF536O15090 1300 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 TNKSO95271 1327 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 PTPDC1A2A3K4 754 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 GOLGA6L3A6NEY3 463 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 SH2B2O14492 632 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 ZBTB43O43298 467 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 PDHBP11177 359 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 STAT3P40763 770 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 LIFRP42702 1097 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 NOVP48745 357 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 METAP2P50579 478 aaKnown RBP eCLIP8□□□□□ -1.13
BRCA1-216ENST00000484087 STAT2P52630 851 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 ANTXR2P58335 489 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 WTAPQ15007 396 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 FOXD4L6Q3SYB3 417 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 FOXD4L3Q6VB84 417 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 RAB11FIP4Q86YS3 637 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 RIOX2Q8IUF8 465 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 ENAHQ8N8S7 591 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 DDX11Q96FC9 970 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 MMP19Q99542 508 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 UBA5Q9GZZ9 404 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 PAK6Q9NQU5 681 aaPredicted RBP8□□□□□ -1.13
BRCA1-216ENST00000484087 ZSWIM5Q9P217 1185 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 PRR12Q9ULL5 1215 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 SLC12A7Q9Y666 1083 aa8□□□□□ -1.13
BRCA1-216ENST00000484087 LAMA3Q16787 3333 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 BAZ2BQ9UIF8 2168 aaKnown RBP7.99□□□□□ -1.13
BRCA1-216ENST00000484087 CCDC196A0A1B0GTZ2 297 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 SLC15A5A6NIM6 579 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 JAK2O60674 1132 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 GJB1P08034 283 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 TOP1P11387 765 aaKnown RBP7.99□□□□□ -1.13
BRCA1-216ENST00000484087 CNGA1P29973 690 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 GJA8P48165 433 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 MUM1L1Q5H9M0 696 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 MAP3K21Q5TCX8 1036 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 DPP9Q86TI2 863 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 SGMS1Q86VZ5 419 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 IQCA1Q86XH1 822 aa7.99□□□□□ -1.13
BRCA1-216ENST00000484087 PRPF38AQ8NAV1 312 aaKnown RBP7.99□□□□□ -1.13
BRCA1-216ENST00000484087 TMEM87AQ8NBN3 555 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms