RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SUPT20HL2P0C7V6 817 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 FDX1P10109 184 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 ACTN1P12814 892 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 DUSP28Q4G0W2 176 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 FAM47CQ5HY64 1035 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 ZSCAN25Q6NSZ9 544 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 TMCO2Q7Z6W1 182 aaPredicted RBP12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 ZNF444Q8N0Y2 327 aaPredicted RBP12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 PHOSPHO2Q8TCD6 241 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 OSBP2Q969R2 916 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 VTA1Q9NP79 307 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 SYNPO2Q9UMS6 1093 aa12.96□□□□□ -0.33
SMARCC1-205ENST00000483847 SCN10AQ9Y5Y9 1956 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 MCCP23508 829 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 RFC2P35250 354 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 NBPF20Q3BBV1 942 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 TKFCQ3LXA3 575 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 GIMAP6Q6P9H5 292 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 NSMFQ6X4W1 530 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 MORC4Q8TE76 937 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 STAG1Q8WVM7 1258 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 POLR3EQ9NVU0 708 aa12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
SMARCC1-205ENST00000483847 RAB11FIP3O75154 756 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 KCTD1Q719H9 257 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 FAM160B2Q86V87 743 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 NEDD1Q8NHV4 660 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 GMCL1Q96IK5 515 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 MTG1Q9BT17 334 aaPredicted RBP12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 WDR11Q9BZH6 1224 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 PRR12Q9ULL5 1215 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
SMARCC1-205ENST00000483847 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 M0R2C6 588 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 GPAA1O43292 621 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 SLC1A4P43007 532 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 TDO2P48775 406 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 RETREG2Q8NC44 543 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 OR6J1Q8NGC5 347 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 MTUS1Q9ULD2 1270 aa12.93□□□□□ -0.34
SMARCC1-205ENST00000483847 RBM47A0AV96 593 aaKnown RBP12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 HMMRO75330 724 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 APPP05067 770 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 CPT1AP50416 773 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 ALDH5A1P51649 535 aaPredicted RBP12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 DEFB103AP81534 67 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 TFAP4Q01664 338 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 BAATQ14032 418 aaPredicted RBP12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 GPNMBQ14956 572 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 TCTN1Q2MV58 587 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 FAM178BQ8IXR5 827 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 APPBP2Q92624 585 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 COPS5Q92905 334 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 UBE2ZQ9H832 354 aaPredicted RBP12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 SUGCTQ9HAC7 445 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 ZNF287Q9HBT7 754 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 CCPG1Q9ULG6 757 aa12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 TRIP12Q14669 1992 aaPredicted RBP12.92□□□□□ -0.34
SMARCC1-205ENST00000483847 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 CCER2I3L3R5 266 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 NFIBO00712 420 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 PLA2G6O60733 806 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 BAIAP3O94812 1187 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 KCNJ6P48051 423 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 NFRKBQ6P4R8 1299 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 GJD3Q8N144 294 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 KBTBD3Q8NAB2 608 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 CTAGE1Q96RT6 745 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 ZBTB40Q9NUA8 1239 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 LMCD1Q9NZU5 365 aa12.91□□□□□ -0.34
SMARCC1-205ENST00000483847 A6NJR5 290 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 RNF113AO15541 343 aaKnown RBP12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 NMT2O60551 498 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 ICAM1P05362 532 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 IL9P15248 144 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 KCNA5P22460 613 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 MRE11P49959 708 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 CHMP4BP1P59074 171 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 BFSP2Q13515 415 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 TSHZ3Q63HK5 1081 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 SLC30A10Q6XR72 485 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 UIMC1Q96RL1 719 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 SEC62Q99442 399 aaKnown RBP12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 ZBED2Q9BTP6 218 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms