RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 OR52Z1P0C646 297 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 PRPHP41219 470 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 CUL4BQ13620 913 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 USH1GQ495M9 461 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 HSP90AA4PQ58FG1 418 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 KANK3Q6NY19 840 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 DLK2Q6UY11 383 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 CCDC186Q7Z3E2 898 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 C17orf53Q8N3J3 647 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 CUL5Q93034 780 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 UIMC1Q96RL1 719 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 MMTAG2Q9BU76 263 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 DISC1Q9NRI5 854 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 FANCLQ9NW38 375 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 CNOT7Q9UIV1 285 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 HOOK1Q9UJC3 728 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 PRR12Q9ULL5 1215 aa10.01□□□□□ -0.81
CDC42SE1-204ENST00000483763 LAD1O00515 517 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 RPS12P25398 132 aaKnown RBP10□□□□□ -0.81
CDC42SE1-204ENST00000483763 MSNP26038 577 aaKnown RBP10□□□□□ -0.81
CDC42SE1-204ENST00000483763 IKQ13123 557 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-204ENST00000483763 DGKZQ13574 1117 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 ARID5BQ14865 1188 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 FAM83BQ5T0W9 1011 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 SYDE2Q5VT97 1194 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 PRAMEF18Q5VWM3 479 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 PPP1R18Q6NYC8 613 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 TRMT44Q8IYL2 757 aaKnown RBP10□□□□□ -0.81
CDC42SE1-204ENST00000483763 IKBKBO14920 756 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 TXKP42681 527 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 MRPL12P52815 198 aaKnown RBP10□□□□□ -0.81
CDC42SE1-204ENST00000483763 MYL5Q02045 173 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 LRMPQ12912 555 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 BTNL9Q6UXG8 535 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 MRFAP1L1Q96HT8 127 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 CCSER1Q9C0I3 900 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 FBXO28Q9NVF7 368 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 FZD1Q9UP38 647 aa10□□□□□ -0.81
CDC42SE1-204ENST00000483763 GLTPD2A6NH11 291 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 UBA7P41226 1012 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 PTPN21Q16825 1174 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 DRC7Q8IY82 874 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 IGSF22Q8N9C0 903 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 BBXQ8WY36 941 aaPredicted RBP9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 DPF2Q92785 391 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 HAS1Q92839 578 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 NUDT12Q9BQG2 462 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 XPO4Q9C0E2 1151 aaKnown RBP9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 DEFB129Q9H1M3 183 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 ARHGEF10LQ9HCE6 1279 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 IFNKQ9P0W0 207 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 HACL1Q9UJ83 578 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 POTEMA6NI47 508 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 COBLO75128 1261 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 STAT6P42226 847 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 STAT2P52630 851 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 CALCRLQ16602 461 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 MLKLQ8NB16 471 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 TBC1D5Q92609 795 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 GSDMAQ96QA5 445 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 AMNQ9BXJ7 453 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 PYCARDQ9ULZ3 195 aa9.99□□□□□ -0.81
CDC42SE1-204ENST00000483763 ZNF500O60304 480 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 SMC2O95347 1197 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 PLCG1P19174 1290 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 HOXA13P31271 388 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 EPS15P42566 896 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 C1QTNF8P60827 252 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 NBPF12Q5TAG4 269 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 RRAGBQ5VZM2 374 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 PPP4R3AQ6IN85 833 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 FBXO11Q86XK2 927 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 TRIML1Q8N9V2 468 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 CACTINQ8WUQ7 758 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 CRYGNQ8WXF5 182 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 VCPKMTQ9H867 229 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 KBTBD4Q9NVX7 518 aa9.98□□□□□ -0.81
CDC42SE1-204ENST00000483763 SMTNL1A8MU46 457 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 PPP1R3GB7ZBB8 358 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 CDC25BP30305 580 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 TXLNAP40222 546 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 FANCCQ00597 558 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 KIF4BQ2VIQ3 1234 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 EAPPQ56P03 285 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 KLHL10Q6JEL2 608 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 FILIP1Q7Z7B0 1213 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 CABP7Q86V35 215 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 SAMSN1Q9NSI8 373 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 DDX25Q9UHL0 483 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 SYNPO2Q9UMS6 1093 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 NFE2L3Q9Y4A8 694 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 MYH7BA7E2Y1 1941 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 H7C1D1 291 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 ASNSP08243 561 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 ZNF18P17022 549 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 INPP5BP32019 993 aa9.97□□□□□ -0.81
CDC42SE1-204ENST00000483763 STX17P56962 302 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms