RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 GPKOWQ92917 476 aaPredicted RBP eCLIP17.63■□□□□ 0.41
CCM2-215ENST00000482714 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
CCM2-215ENST00000482714 PRDM10Q9NQV6 1147 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 HOMER2Q9NSB8 354 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 CYP39A1Q9NYL5 469 aa17.63■□□□□ 0.41
CCM2-215ENST00000482714 DNAJC25-GNG10A0A024R161 153 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 B4DLN1 442 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 NFIBO00712 420 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 GJB2P29033 226 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 RPS6P62753 249 aaKnown RBP17.62■□□□□ 0.41
CCM2-215ENST00000482714 MAP2K5Q13163 448 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 TYW1BQ6NUM6 668 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 DNERQ8NFT8 737 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 FBXO18Q8NFZ0 1043 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 USP6NLQ92738 828 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 C8orf76Q96K31 380 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 TRIM47Q96LD4 638 aa17.62■□□□□ 0.41
CCM2-215ENST00000482714 ADD3Q9UEY8 706 aaKnown RBP17.62■□□□□ 0.41
CCM2-215ENST00000482714 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
CCM2-215ENST00000482714 POTEB2H3BUK9 544 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 MEIS2O14770 477 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 OPLAHO14841 1288 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 PPFIA3O75145 1194 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 CFBP00751 764 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 RGS2P41220 211 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 ADCY7P51828 1080 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 IRF5Q13568 498 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 BAATQ14032 418 aaPredicted RBP17.61■□□□□ 0.41
CCM2-215ENST00000482714 NSMFQ6X4W1 530 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 ZNF467Q7Z7K2 595 aaPredicted RBP17.61■□□□□ 0.41
CCM2-215ENST00000482714 DPP9Q86TI2 863 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 TRMT44Q8IYL2 757 aaKnown RBP17.61■□□□□ 0.41
CCM2-215ENST00000482714 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
CCM2-215ENST00000482714 FAM133AQ8N9E0 248 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 DAGLBQ8NCG7 672 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 CD99L2Q8TCZ2 262 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 PHF20Q9BVI0 1012 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 VPS54Q9P1Q0 977 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 SRRDQ9UH36 339 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 PCDHA4Q9UN74 947 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 SMCHD1A6NHR9 2005 aa17.61■□□□□ 0.41
CCM2-215ENST00000482714 ADORA2AP29274 412 aa17.6■□□□□ 0.41
CCM2-215ENST00000482714 CTGFP29279 349 aa17.6■□□□□ 0.41
CCM2-215ENST00000482714 SAFBQ15424 915 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCM2-215ENST00000482714 LARP1BQ659C4 914 aaKnown RBP17.6■□□□□ 0.41
CCM2-215ENST00000482714 SYTL5Q8TDW5 730 aaPredicted RBP17.6■□□□□ 0.41
CCM2-215ENST00000482714 TBC1D5Q92609 795 aa17.6■□□□□ 0.41
CCM2-215ENST00000482714 MPHOSPH6Q99547 160 aaKnown RBP17.6■□□□□ 0.41
CCM2-215ENST00000482714 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
CCM2-215ENST00000482714 TSKSQ9UJT2 592 aa17.6■□□□□ 0.41
CCM2-215ENST00000482714 AP3B2Q13367 1082 aa17.59■□□□□ 0.41
CCM2-215ENST00000482714 ZNF792Q3KQV3 632 aa17.59■□□□□ 0.41
CCM2-215ENST00000482714 AIFM3Q96NN9 605 aa17.59■□□□□ 0.41
CCM2-215ENST00000482714 IWS1Q96ST2 819 aa17.59■□□□□ 0.41
CCM2-215ENST00000482714 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
CCM2-215ENST00000482714 CLK2P49760 499 aaKnown RBP17.58■□□□□ 0.41
CCM2-215ENST00000482714 PKN2Q16513 984 aaKnown RBP17.58■□□□□ 0.41
CCM2-215ENST00000482714 KRT40Q6A162 431 aa17.58■□□□□ 0.41
CCM2-215ENST00000482714 BLIDQ8IZY5 108 aa17.58■□□□□ 0.41
CCM2-215ENST00000482714 NSUN6Q8TEA1 469 aaKnown RBP17.58■□□□□ 0.41
CCM2-215ENST00000482714 ARHGAP39Q9C0H5 1083 aa17.58■□□□□ 0.41
CCM2-215ENST00000482714 EHMT1Q9H9B1 1298 aa17.58■□□□□ 0.41
CCM2-215ENST00000482714 SPDYE3A6NKU9 549 aa17.57■□□□□ 0.4
CCM2-215ENST00000482714 MMP1P03956 469 aa17.57■□□□□ 0.4
CCM2-215ENST00000482714 FLT3LGP49771 235 aa17.57■□□□□ 0.4
CCM2-215ENST00000482714 XRRA1Q6P2D8 792 aa17.57■□□□□ 0.4
CCM2-215ENST00000482714 REXO1Q8N1G1 1221 aaKnown RBP17.57■□□□□ 0.4
CCM2-215ENST00000482714 PXYLP1Q8TE99 480 aa17.57■□□□□ 0.4
CCM2-215ENST00000482714 ASB14A6NK59 587 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 COBLO75128 1261 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 IFFO2Q5TF58 517 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 OLFML2BQ68BL8 750 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 USP17L6PQ6QN14 398 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 MAMDC4Q6UXC1 1216 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 OTOP1Q7RTM1 612 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 FOXP1Q9H334 677 aaPredicted RBP17.56■□□□□ 0.4
CCM2-215ENST00000482714 KCNJ14Q9UNX9 436 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 DOCK3Q8IZD9 2030 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 H3BQV1 296 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 M0R2N6 131 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 TAL1P17542 331 aaPredicted RBP17.56■□□□□ 0.4
CCM2-215ENST00000482714 KRT2P35908 639 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 NPY5RQ15761 445 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 TNS4Q8IZW8 715 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 MORC4Q8TE76 937 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 SHISA4Q96DD7 197 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 TAAR1Q96RJ0 339 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 RMDN3Q96TC7 470 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 APBA2Q99767 749 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 PCDHA6Q9UN73 950 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 TRIM17Q9Y577 477 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 PCDHA8Q9Y5H6 950 aa17.56■□□□□ 0.4
CCM2-215ENST00000482714 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
CCM2-215ENST00000482714 PGK2P07205 417 aa17.55■□□□□ 0.4
CCM2-215ENST00000482714 HOXA13P31271 388 aaPredicted RBP17.55■□□□□ 0.4
CCM2-215ENST00000482714 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
CCM2-215ENST00000482714 CTU1Q7Z7A3 348 aaKnown RBP17.55■□□□□ 0.4
CCM2-215ENST00000482714 FCHSD1Q86WN1 690 aa17.55■□□□□ 0.4
CCM2-215ENST00000482714 MAML3Q96JK9 1138 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms