RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 DGKZQ13574 1117 aa16.31■□□□□ 0.2
CHD3-211ENST00000481999 ARL6IP4Q66PJ3 421 aaKnown RBP16.31■□□□□ 0.2
CHD3-211ENST00000481999 TAOK3Q9H2K8 898 aa16.31■□□□□ 0.2
CHD3-211ENST00000481999 NYAP2Q9P242 653 aa16.31■□□□□ 0.2
CHD3-211ENST00000481999 NFE2L3Q9Y4A8 694 aa16.31■□□□□ 0.2
CHD3-211ENST00000481999 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 MKL1Q969V6 931 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 DISC1Q9NRI5 854 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 POTEMA6NI47 508 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 OR52Z1P0C646 297 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 LONP1P36776 959 aaKnown RBP16.3■□□□□ 0.2
CHD3-211ENST00000481999 STAT6P42226 847 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 MORC2Q9Y6X9 1032 aaPredicted RBP16.3■□□□□ 0.2
CHD3-211ENST00000481999 MYH7BA7E2Y1 1941 aa16.3■□□□□ 0.2
CHD3-211ENST00000481999 E4F1Q66K89 784 aaPredicted RBP16.29■□□□□ 0.2
CHD3-211ENST00000481999 SAMD7Q7Z3H4 446 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 NLGN2Q8NFZ4 835 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 PSTPIP2Q9H939 334 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 INTS13Q9NVM9 706 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 HDAC9Q9UKV0 1011 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 FZD1Q9UP38 647 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 GDAQ9Y2T3 454 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 SERPINC1P01008 464 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 TUBB4AP04350 444 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 UBA7P41226 1012 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 UBASH3AP57075 661 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 MTMR8Q96EF0 704 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 NUDT12Q9BQG2 462 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 CGNQ9P2M7 1197 aaKnown RBP16.29■□□□□ 0.2
CHD3-211ENST00000481999 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 KIF13BQ9NQT8 1826 aa16.29■□□□□ 0.2
CHD3-211ENST00000481999 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
CHD3-211ENST00000481999 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
CHD3-211ENST00000481999 PLCG1P19174 1290 aa16.28■□□□□ 0.2
CHD3-211ENST00000481999 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
CHD3-211ENST00000481999 MMTAG2Q9BU76 263 aaKnown RBP16.28■□□□□ 0.2
CHD3-211ENST00000481999 KANK3Q6NY19 840 aa16.28■□□□□ 0.2
CHD3-211ENST00000481999 FAM151AQ8WW52 585 aa16.28■□□□□ 0.2
CHD3-211ENST00000481999 PPP1R13BQ96KQ4 1090 aa16.28■□□□□ 0.2
CHD3-211ENST00000481999 FEZ1Q99689 392 aa16.28■□□□□ 0.2
CHD3-211ENST00000481999 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
CHD3-211ENST00000481999 CCP110O43303 1012 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.2
CHD3-211ENST00000481999 CLK2P49760 499 aaKnown RBP16.27■□□□□ 0.2
CHD3-211ENST00000481999 JDP2Q8WYK2 163 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 SYT17Q9BSW7 474 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 MYOZ2Q9NPC6 264 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 TGFB2P61812 414 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 FAM83BQ5T0W9 1011 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 PRAMEF18Q5VWM3 479 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 RRAGBQ5VZM2 374 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 CIAPIN1Q6FI81 312 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 CUL5Q93034 780 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 GJA3Q9Y6H8 435 aa16.27■□□□□ 0.2
CHD3-211ENST00000481999 PPP1R3GB7ZBB8 358 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 CALCRLQ16602 461 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 CABP7Q86V35 215 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 MLKLQ8NB16 471 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 HPS3Q969F9 1004 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 ERO1AQ96HE7 468 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 ZFP91Q96JP5 570 aaPredicted RBP16.26■□□□□ 0.19
CHD3-211ENST00000481999 ZNF215Q9UL58 517 aaPredicted RBP16.26■□□□□ 0.19
CHD3-211ENST00000481999 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 BMP3P12645 472 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 TXLNAP40222 546 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
CHD3-211ENST00000481999 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 VSTM4Q8IW00 320 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 MTMR9Q96QG7 549 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 FBXO28Q9NVF7 368 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 DACH1Q9UI36 760 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 BRCA1P38398 1863 aaKnown RBP16.26■□□□□ 0.19
CHD3-211ENST00000481999 FER1L6Q2WGJ9 1857 aa16.26■□□□□ 0.19
CHD3-211ENST00000481999 MEIS2O14770 477 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 CBX1P83916 185 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 RASA3Q14644 834 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 TBC1D5Q92609 795 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 ARFGEF1Q9Y6D6 1849 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 TRIM49BA6NDI0 452 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 OPLAHO14841 1288 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 GMCL1P1Q8NEA9 526 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 HAS1Q92839 578 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 GSDMAQ96QA5 445 aa16.25■□□□□ 0.19
CHD3-211ENST00000481999 HERC5Q9UII4 1024 aaKnown RBP16.25■□□□□ 0.19
CHD3-211ENST00000481999 SLU7O95391 586 aaKnown RBP16.24■□□□□ 0.19
CHD3-211ENST00000481999 RPN1P04843 607 aaKnown RBP16.24■□□□□ 0.19
CHD3-211ENST00000481999 ZNF18P17022 549 aa16.24■□□□□ 0.19
CHD3-211ENST00000481999 NAA30Q147X3 362 aaPredicted RBP16.24■□□□□ 0.19
CHD3-211ENST00000481999 ECM1Q16610 540 aa16.24■□□□□ 0.19
CHD3-211ENST00000481999 SYDE2Q5VT97 1194 aa16.24■□□□□ 0.19
CHD3-211ENST00000481999 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
CHD3-211ENST00000481999 TRIML1Q8N9V2 468 aa16.24■□□□□ 0.19
CHD3-211ENST00000481999 AGBL3Q8NEM8 1001 aa16.24■□□□□ 0.19
CHD3-211ENST00000481999 PGAP2Q9UHJ9 254 aa16.24■□□□□ 0.19
CHD3-211ENST00000481999 PRR12Q9ULL5 1215 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms