RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 POLR2MP0CAP2 368 aa23.8■■□□□ 1.4
VPS16-207ENST00000481812 PSMC4P43686 418 aa23.8■■□□□ 1.4
VPS16-207ENST00000481812 GRB14Q14449 540 aa23.8■■□□□ 1.4
VPS16-207ENST00000481812 WDR78Q5VTH9 848 aa23.8■■□□□ 1.4
VPS16-207ENST00000481812 LARP1BQ659C4 914 aaKnown RBP23.8■■□□□ 1.4
VPS16-207ENST00000481812 KRT40Q6A162 431 aa23.8■■□□□ 1.4
VPS16-207ENST00000481812 RNF207Q6ZRF8 634 aa23.8■■□□□ 1.4
VPS16-207ENST00000481812 ANKRD35Q8N283 1001 aa23.8■■□□□ 1.4
VPS16-207ENST00000481812 ZNF296Q8WUU4 475 aaPredicted RBP23.8■■□□□ 1.4
VPS16-207ENST00000481812 DNAJC25-GNG10A0A024R161 153 aa23.79■■□□□ 1.4
VPS16-207ENST00000481812 MEIS2O14770 477 aa23.79■■□□□ 1.4
VPS16-207ENST00000481812 CFBP00751 764 aa23.79■■□□□ 1.4
VPS16-207ENST00000481812 RPS6P62753 249 aaKnown RBP23.79■■□□□ 1.4
VPS16-207ENST00000481812 MORN1Q5T089 497 aa23.79■■□□□ 1.4
VPS16-207ENST00000481812 NSMFQ6X4W1 530 aa23.79■■□□□ 1.4
VPS16-207ENST00000481812 TBC1D5Q92609 795 aa23.79■■□□□ 1.4
VPS16-207ENST00000481812 FOXD4L1Q9NU39 408 aa23.79■■□□□ 1.4
VPS16-207ENST00000481812 PCDHA4Q9UN74 947 aa23.79■■□□□ 1.4
VPS16-207ENST00000481812 TNPO2O14787 897 aaKnown RBP23.78■■□□□ 1.4
VPS16-207ENST00000481812 MMP1P03956 469 aa23.78■■□□□ 1.4
VPS16-207ENST00000481812 CTGFP29279 349 aa23.78■■□□□ 1.4
VPS16-207ENST00000481812 CLK2P49760 499 aaKnown RBP23.78■■□□□ 1.4
VPS16-207ENST00000481812 BAATQ14032 418 aaPredicted RBP23.78■■□□□ 1.4
VPS16-207ENST00000481812 NPY5RQ15761 445 aa23.78■■□□□ 1.4
VPS16-207ENST00000481812 SOCS4Q8WXH5 440 aa23.78■■□□□ 1.4
VPS16-207ENST00000481812 TRIM47Q96LD4 638 aa23.78■■□□□ 1.4
VPS16-207ENST00000481812 GJB4Q9NTQ9 266 aa23.78■■□□□ 1.4
VPS16-207ENST00000481812 DAXXQ9UER7 740 aaPredicted RBP23.78■■□□□ 1.4
VPS16-207ENST00000481812 PLXNA1Q9UIW2 1896 aa23.78■■□□□ 1.4
VPS16-207ENST00000481812 LCTP09848 1927 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 FOSP01100 380 aaPredicted RBP23.77■■□□□ 1.4
VPS16-207ENST00000481812 HOXD10P28358 340 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 BLIDQ8IZY5 108 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 SYTL5Q8TDW5 730 aaPredicted RBP23.77■■□□□ 1.4
VPS16-207ENST00000481812 USP6NLQ92738 828 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 NUDT12Q9BQG2 462 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 BRMS1Q9HCU9 246 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 TSKSQ9UJT2 592 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 GJD2Q9UKL4 321 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 KCNJ14Q9UNX9 436 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 DIS3Q9Y2L1 958 aaKnown RBP23.77■■□□□ 1.4
VPS16-207ENST00000481812 ZSWIM8A7E2V4 1837 aa23.77■■□□□ 1.4
VPS16-207ENST00000481812 CASP8AP2Q9UKL3 1982 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 LOC102724159A0A0B4J2E5 919 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 M0R2N6 131 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 HOXC6P09630 235 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 HSPA1AP0DMV8 641 aaKnown RBP23.76■■□□□ 1.39
VPS16-207ENST00000481812 HSPA1BP0DMV9 641 aaKnown RBP23.76■■□□□ 1.39
VPS16-207ENST00000481812 ADORA2AP29274 412 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 CTCFP49711 727 aaPredicted RBP23.76■■□□□ 1.39
VPS16-207ENST00000481812 AP3B2Q13367 1082 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 PWP2Q15269 919 aaKnown RBP23.76■■□□□ 1.39
VPS16-207ENST00000481812 SAFBQ15424 915 aaKnown RBP eCLIP23.76■■□□□ 1.39
VPS16-207ENST00000481812 USP17L6PQ6QN14 398 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 REXO1Q8N1G1 1221 aaKnown RBP23.76■■□□□ 1.39
VPS16-207ENST00000481812 FAM133AQ8N9E0 248 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 DNERQ8NFT8 737 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 CD99L2Q8TCZ2 262 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 ARHGAP39Q9C0H5 1083 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 SLC5A4Q9NY91 659 aa23.76■■□□□ 1.39
VPS16-207ENST00000481812 POTEB2H3BUK9 544 aa23.75■■□□□ 1.39
VPS16-207ENST00000481812 FOXN1O15353 648 aa23.75■■□□□ 1.39
VPS16-207ENST00000481812 HSPA8P11142 646 aaKnown RBP23.75■■□□□ 1.39
VPS16-207ENST00000481812 SYT1P21579 422 aa23.75■■□□□ 1.39
VPS16-207ENST00000481812 PRMT2P55345 433 aa23.75■■□□□ 1.39
VPS16-207ENST00000481812 MAP2K5Q13163 448 aa23.75■■□□□ 1.39
VPS16-207ENST00000481812 SLC30A10Q6XR72 485 aa23.75■■□□□ 1.39
VPS16-207ENST00000481812 SPRYD3Q8NCJ5 442 aa23.75■■□□□ 1.39
VPS16-207ENST00000481812 H3BQV1 296 aa23.74■■□□□ 1.39
VPS16-207ENST00000481812 KRT2P35908 639 aa23.74■■□□□ 1.39
VPS16-207ENST00000481812 ZNF792Q3KQV3 632 aa23.74■■□□□ 1.39
VPS16-207ENST00000481812 IFFO2Q5TF58 517 aa23.74■■□□□ 1.39
VPS16-207ENST00000481812 ADD3Q9UEY8 706 aaKnown RBP23.74■■□□□ 1.39
VPS16-207ENST00000481812 HOXA13P31271 388 aaPredicted RBP23.73■■□□□ 1.39
VPS16-207ENST00000481812 RGS2P41220 211 aa23.73■■□□□ 1.39
VPS16-207ENST00000481812 CAP1Q01518 475 aa23.73■■□□□ 1.39
VPS16-207ENST00000481812 UBE2SQ16763 222 aa23.73■■□□□ 1.39
VPS16-207ENST00000481812 ZNF467Q7Z7K2 595 aaPredicted RBP23.73■■□□□ 1.39
VPS16-207ENST00000481812 DIS3L2Q8IYB7 885 aaKnown RBP23.73■■□□□ 1.39
VPS16-207ENST00000481812 IPO9Q96P70 1041 aaKnown RBP23.73■■□□□ 1.39
VPS16-207ENST00000481812 FOXP1Q9H334 677 aaPredicted RBP23.73■■□□□ 1.39
VPS16-207ENST00000481812 COL20A1Q9P218 1284 aa23.73■■□□□ 1.39
VPS16-207ENST00000481812 SRRDQ9UH36 339 aa23.73■■□□□ 1.39
VPS16-207ENST00000481812 SPDYE3A6NKU9 549 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 COBLO75128 1261 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 XRCC5P13010 732 aaKnown RBP23.72■■□□□ 1.39
VPS16-207ENST00000481812 FOSBP53539 338 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 GUCY1B3Q02153 619 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 DPP9Q86TI2 863 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 EHMT1Q9H9B1 1298 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 BIN2Q9UBW5 565 aaPredicted RBP23.72■■□□□ 1.39
VPS16-207ENST00000481812 PCDHA6Q9UN73 950 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 PCDHA8Q9Y5H6 950 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 FRMPD4Q14CM0 1322 aa23.72■■□□□ 1.39
VPS16-207ENST00000481812 ADAMTS3O15072 1205 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 STX6O43752 255 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 PGK2P07205 417 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 U2AF2P26368 475 aaKnown RBP eCLIP23.71■■□□□ 1.39
VPS16-207ENST00000481812 CNTN2Q02246 1040 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 IRF5Q13568 498 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms