RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 GOLGA8DPQ0D2H9 430 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 FKBP1CQ5VVH2 108 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 PKNOX2Q96KN3 472 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 GSDMAQ96QA5 445 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 DDX41Q9UJV9 622 aaKnown RBP20.74■□□□□ 0.91
MRPL28-209ENST00000481453 NFKBIEO00221 500 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 TXLNAP40222 546 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 ETF1P62495 437 aaKnown RBP20.74■□□□□ 0.91
MRPL28-209ENST00000481453 KMT5BQ4FZB7 885 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 LRRC15Q8TF66 581 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 TAOK3Q9H2K8 898 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 INTS13Q9NVM9 706 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 PGAP2Q9UHJ9 254 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 NFE2L3Q9Y4A8 694 aa20.74■□□□□ 0.91
MRPL28-209ENST00000481453 CD44P16070 742 aaKnown RBP20.73■□□□□ 0.91
MRPL28-209ENST00000481453 CDC37Q16543 378 aaPredicted RBP20.73■□□□□ 0.91
MRPL28-209ENST00000481453 BLZF1Q9H2G9 400 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 PRDM4Q9UKN5 801 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 SHTN1A0MZ66 631 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 GTPBP6O43824 516 aaPredicted RBP20.73■□□□□ 0.91
MRPL28-209ENST00000481453 CUL4BQ13620 913 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 ENOX1Q8TC92 643 aaKnown RBP20.73■□□□□ 0.91
MRPL28-209ENST00000481453 CUL5Q93034 780 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 MTMR9Q96QG7 549 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 TMEM39BQ9GZU3 492 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 VEZTQ9HBM0 779 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 DNAI1Q9UI46 699 aa20.73■□□□□ 0.91
MRPL28-209ENST00000481453 SLC37A4O43826 429 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 STAT6P42226 847 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 UTP14CQ5TAP6 766 aaKnown RBP20.72■□□□□ 0.91
MRPL28-209ENST00000481453 CIAPIN1Q6FI81 312 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 TRMT44Q8IYL2 757 aaKnown RBP20.72■□□□□ 0.91
MRPL28-209ENST00000481453 AK8Q96MA6 479 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 TDP2O95551 362 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 FBXO38Q6PIJ6 1188 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 SGIP1Q9BQI5 828 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 PSTPIP2Q9H939 334 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 SYNPO2Q9UMS6 1093 aa20.72■□□□□ 0.91
MRPL28-209ENST00000481453 PHLPP2Q6ZVD8 1323 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 ARHGAP6O43182 974 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 ZSCAN12O43309 604 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 ZNF18P17022 549 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 ERCC5P28715 1186 aaPredicted RBP20.71■□□□□ 0.91
MRPL28-209ENST00000481453 UBA7P41226 1012 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 TNNI2P48788 182 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 NBPF9Q3BBW0 867 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 FAM83AQ86UY5 434 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 FCHSD1Q86WN1 690 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 GTPBP4Q9BZE4 634 aaKnown RBP20.71■□□□□ 0.91
MRPL28-209ENST00000481453 MYH7BA7E2Y1 1941 aa20.71■□□□□ 0.91
MRPL28-209ENST00000481453 WNT10BO00744 389 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 ECE1P42892 770 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 MRPL12P52815 198 aaKnown RBP20.7■□□□□ 0.9
MRPL28-209ENST00000481453 KIAA1755Q5JYT7 1200 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 BTNL9Q6UXG8 535 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 SMYD4Q8IYR2 804 aaPredicted RBP20.7■□□□□ 0.9
MRPL28-209ENST00000481453 IGSF22Q8N9C0 903 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 PCDHA1Q9Y5I3 950 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.7■□□□□ 0.91e-7■□□□□ 8.2
MRPL28-209ENST00000481453 PPP1R3GB7ZBB8 358 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 BMP3P12645 472 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 SNAP25P60880 206 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 TBX2Q13207 712 aaPredicted RBP20.7■□□□□ 0.9
MRPL28-209ENST00000481453 CT47A1Q5JQC4 288 aaPredicted RBP20.7■□□□□ 0.9
MRPL28-209ENST00000481453 RRAGBQ5VZM2 374 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 REXO1L1PQ8IX06 675 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 ACER1Q8TDN7 264 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 MMTAG2Q9BU76 263 aaKnown RBP20.7■□□□□ 0.9
MRPL28-209ENST00000481453 ZBTB21Q9ULJ3 1066 aa20.7■□□□□ 0.9
MRPL28-209ENST00000481453 TBC1D12O60347 775 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 TECP42680 631 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 ERCC6LQ2NKX8 1250 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 SYDE2Q5VT97 1194 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 SPECC1LQ69YQ0 1117 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 TRIM65Q6PJ69 517 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 CABP7Q86V35 215 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 TMEM139Q8IV31 216 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 BAG1Q99933 345 aaPredicted RBP20.69■□□□□ 0.9
MRPL28-209ENST00000481453 MYOZ2Q9NPC6 264 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 PLIN2Q99541 437 aa20.69■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L15C9J2P7 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L13C9JLJ4 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L11C9JVI0 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L18D6R9N7 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L22D6RA61 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L17D6RBQ6 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L19D6RCP7 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L20D6RJB6 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L24Q0WX57 530 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 R3HDM1Q15032 1099 aaKnown RBP20.68■□□□□ 0.9
MRPL28-209ENST00000481453 CALCRLQ16602 461 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 PPP4R3AQ6IN85 833 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 USP17L6PQ6QN14 398 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 LRRN4CLQ8ND94 238 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 JDP2Q8WYK2 163 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 KBTBD4Q9NVX7 518 aa20.68■□□□□ 0.9
MRPL28-209ENST00000481453 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.68■□□□□ 0.9
MRPL28-209ENST00000481453 PPP1R1BQ9UD71 204 aaPredicted RBP20.68■□□□□ 0.9
MRPL28-209ENST00000481453 RPN1P04843 607 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms