RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 PHF20Q9BVI0 1012 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 CDADC1Q9BWV3 514 aa7.39□□□□□ -1.23
UPF3A-207ENST00000481131 INTS7Q9NVH2 962 aaKnown RBP7.39□□□□□ -1.23
UPF3A-207ENST00000481131 MAGEC2Q9UBF1 373 aaPredicted RBP7.39□□□□□ -1.23
UPF3A-207ENST00000481131 NOP58Q9Y2X3 529 aaKnown RBP7.39□□□□□ -1.23
UPF3A-207ENST00000481131 TNPO3Q9Y5L0 923 aaKnown RBP7.39□□□□□ -1.23
UPF3A-207ENST00000481131 hCG_2014768A0A024R1R8 64 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 KIAA1324LA8MWY0 1029 aaPredicted RBP7.38□□□□□ -1.23
UPF3A-207ENST00000481131 MEFVO15553 781 aaPredicted RBP7.38□□□□□ -1.23
UPF3A-207ENST00000481131 EFCAB14O75071 495 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 SPINK2P20155 84 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 STAT3P40763 770 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 AOC3Q16853 763 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 INF2Q27J81 1249 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 RNF180Q86T96 592 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 WFDC3Q8IUB2 231 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 KSR1Q8IVT5 923 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 RPUSD2Q8IZ73 545 aaKnown RBP7.38□□□□□ -1.23
UPF3A-207ENST00000481131 TMEM52Q8NDY8 209 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 ZCRB1Q8TBF4 217 aaKnown RBP7.38□□□□□ -1.23
UPF3A-207ENST00000481131 ERVK13-1Q9NX77 482 aa7.38□□□□□ -1.23
UPF3A-207ENST00000481131 SSU72P8A0A1W2PR75 194 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 TCRBV16S1A1N1A0A5B0 115 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 COBLO75128 1261 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 CRTAMO95727 393 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 LTBRP36941 435 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 PRKCQQ04759 706 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 BNIP3Q12983 259 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 E4F1Q66K89 784 aaPredicted RBP7.37□□□□□ -1.23
UPF3A-207ENST00000481131 CNNM4Q6P4Q7 775 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 UBR7Q8N806 425 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 RCBTB1Q8NDN9 531 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 DDX1Q92499 740 aaKnown RBP7.37□□□□□ -1.23
UPF3A-207ENST00000481131 GPR27Q9NS67 375 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 VAV3Q9UKW4 847 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 PCDHA9Q9Y5H5 950 aa7.37□□□□□ -1.23
UPF3A-207ENST00000481131 KCNA6P17658 529 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 PAMP19021 973 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 RPL10P27635 214 aaKnown RBP7.36□□□□□ -1.23
UPF3A-207ENST00000481131 GPR85P60893 370 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 KCNAB2Q13303 367 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 RSPO2Q6UXX9 243 aaPredicted RBP7.36□□□□□ -1.23
UPF3A-207ENST00000481131 WAPLQ7Z5K2 1190 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 ASB11Q8WXH4 323 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 DIO2Q92813 273 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 MMP19Q99542 508 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 G6PC3Q9BUM1 346 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 EBF1Q9UH73 591 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 PCDHA8Q9Y5H6 950 aa7.36□□□□□ -1.23
UPF3A-207ENST00000481131 NPHP3-ACAD11A0A0J9YXS1 232 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 AQP7O14520 342 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 ASLP04424 464 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 IBSPP21815 317 aaPredicted RBP7.35□□□□□ -1.23
UPF3A-207ENST00000481131 IGBP1P78318 339 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 ABHD17CQ6PCB6 329 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 CPNE8Q86YQ8 564 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 JAMLQ86YT9 394 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 CHAC2Q8WUX2 184 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 BCL7CQ8WUZ0 217 aaPredicted RBP7.35□□□□□ -1.23
UPF3A-207ENST00000481131 MAGEB10Q96LZ2 347 aaPredicted RBP7.35□□□□□ -1.23
UPF3A-207ENST00000481131 ZFYVE21Q9BQ24 234 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 MTFR1LQ9H019 292 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 CAAP1Q9H8G2 361 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 FBXL7Q9UJT9 491 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 MAPRE3Q9UPY8 281 aa7.35□□□□□ -1.23
UPF3A-207ENST00000481131 ARVCFO00192 962 aa7.34□□□□□ -1.23
UPF3A-207ENST00000481131 HMGB1P09429 215 aaKnown RBP7.34□□□□□ -1.23
UPF3A-207ENST00000481131 POU3F2P20265 443 aaPredicted RBP7.34□□□□□ -1.23
UPF3A-207ENST00000481131 GUCY1A3Q02108 690 aa7.34□□□□□ -1.23
UPF3A-207ENST00000481131 PCBP1Q15365 356 aaKnown RBP eCLIP7.34□□□□□ -1.23
UPF3A-207ENST00000481131 LBX2Q6XYB7 198 aa7.34□□□□□ -1.23
UPF3A-207ENST00000481131 SPRED2Q7Z698 418 aa7.34□□□□□ -1.23
UPF3A-207ENST00000481131 IFNL3Q8IZI9 196 aa7.34□□□□□ -1.23
UPF3A-207ENST00000481131 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.34□□□□□ -1.23
UPF3A-207ENST00000481131 FCRL2Q96LA5 508 aaPredicted RBP7.34□□□□□ -1.23
UPF3A-207ENST00000481131 CARS2Q9HA77 564 aaKnown RBP7.34□□□□□ -1.23
UPF3A-207ENST00000481131 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.23
UPF3A-207ENST00000481131 C7orf72A4D263 438 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 OPA1O60313 960 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 ENDOUP21128 410 aaKnown RBP7.33□□□□□ -1.24
UPF3A-207ENST00000481131 CNGA1P29973 690 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 IGFALSP35858 605 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 ANAPC15P60006 121 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 IKZF1Q13422 519 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 LAPTM5Q13571 262 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 SEPT7Q16181 437 aaKnown RBP7.33□□□□□ -1.24
UPF3A-207ENST00000481131 IQCEQ6IPM2 695 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 CYP2R1Q6VVX0 501 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 ZNF574Q6ZN55 896 aaPredicted RBP7.33□□□□□ -1.24
UPF3A-207ENST00000481131 NFXL1Q6ZNB6 911 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 STRA8Q7Z7C7 330 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 MTDHQ86UE4 582 aaKnown RBP7.33□□□□□ -1.24
UPF3A-207ENST00000481131 DTX1Q86Y01 620 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 AFAP1L2Q8N4X5 818 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 NAT16Q8N8M0 369 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 DPF3Q92784 378 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 MISP3Q96FF7 219 aa7.33□□□□□ -1.24
UPF3A-207ENST00000481131 CDIP1Q9H305 208 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms