RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 TRPA1O75762 1119 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 NF2P35240 595 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 ZEB1P37275 1124 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-216ENST00000481048 CASP7P55210 303 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 DNM1Q05193 864 aaKnown RBP8.18□□□□□ -1.1
LRCH3-216ENST00000481048 FDX2Q6P4F2 183 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 C15orf52Q6ZUT6 534 aaKnown RBP8.18□□□□□ -1.1
LRCH3-216ENST00000481048 G2E3Q7L622 706 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 MCOLN1Q9GZU1 580 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 DZANK1Q9NVP4 752 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 RNF186Q9NXI6 227 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 ZNF804BA4D1E1 1349 aa8.18□□□□□ -1.1
LRCH3-216ENST00000481048 ANP32CO43423 234 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 PCSK2P16519 638 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 IFIT5Q13325 482 aaKnown RBP8.17□□□□□ -1.1
LRCH3-216ENST00000481048 CCDC184Q52MB2 194 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 NOM1Q5C9Z4 860 aaKnown RBP8.17□□□□□ -1.1
LRCH3-216ENST00000481048 XKR5Q6UX68 686 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 DLK2Q6UY11 383 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 DTX1Q86Y01 620 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 RASAL3Q86YV0 1011 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 APOBEC3FQ8IUX4 373 aaKnown RBP8.17□□□□□ -1.1
LRCH3-216ENST00000481048 TTC16Q8NEE8 873 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 HHIPQ96QV1 700 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 KRTAP9-9Q9BYP9 154 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 KRTAP9-4Q9BYQ2 154 aa8.17□□□□□ -1.1
LRCH3-216ENST00000481048 ASTN2O75129 1339 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-216ENST00000481048 KIAA0100Q14667 2235 aaKnown RBP8.17□□□□□ -1.1
LRCH3-216ENST00000481048 A6NHS1 94 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 WTIPA6NIX2 430 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-216ENST00000481048 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 WNT11O96014 354 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 KCNJ4P48050 445 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 TM4SF4P48230 202 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 ARL4DP49703 201 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 FKBP1AP62942 108 aaKnown RBP8.16□□□□□ -1.1
LRCH3-216ENST00000481048 CHRNDQ07001 517 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 PKN2Q16513 984 aaKnown RBP8.16□□□□□ -1.1
LRCH3-216ENST00000481048 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 C8orf34Q49A92 452 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 HGSNATQ68CP4 663 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 ARMC9Q7Z3E5 817 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 MRS2Q9HD23 443 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 CD209Q9NNX6 404 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 FANCIQ9NVI1 1328 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 HIF3AQ9Y2N7 669 aa8.16□□□□□ -1.1
LRCH3-216ENST00000481048 A0A1B0GUL6 1792 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 COL1A1P02452 1464 aaPredicted RBP8.15□□□□□ -1.1
LRCH3-216ENST00000481048 WDR64B1ANS9 1081 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 GAS2O43903 313 aaKnown RBP8.15□□□□□ -1.1
LRCH3-216ENST00000481048 IL1R1P14778 569 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 INHBEP58166 350 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 FOXO4P98177 505 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 C19orf57Q0VDD7 668 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 CCDC57Q2TAC2 916 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 BEND3Q5T5X7 828 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 PBXIP1Q96AQ6 731 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 ZBED3Q96IU2 234 aaPredicted RBP8.15□□□□□ -1.1
LRCH3-216ENST00000481048 SOX13Q9UN79 622 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 PPP2R3BQ9Y5P8 575 aa8.15□□□□□ -1.1
LRCH3-216ENST00000481048 UBE2Q2LH0YL09 131 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 MYO1BO43795 1136 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 ALDH1L1O75891 902 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 PDGFAP04085 211 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 EXOSC9Q06265 439 aaKnown RBP8.14□□□□□ -1.11
LRCH3-216ENST00000481048 SREBF2Q12772 1141 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 DLGAP5Q15398 846 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 MAP3K11Q16584 847 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 LDHAL6AQ6ZMR3 332 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 ZNF804AQ7Z570 1209 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 CTU1Q7Z7A3 348 aaKnown RBP8.14□□□□□ -1.11
LRCH3-216ENST00000481048 KIAA0825Q8IV33 1275 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 HELQQ8TDG4 1101 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 PMEPA1Q969W9 287 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 MFSD14AQ96MC6 490 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 LAMB1P07942 1786 aa8.14□□□□□ -1.11
LRCH3-216ENST00000481048 IRS2Q9Y4H2 1338 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 MEGF11A6BM72 1044 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 GRM8O00222 908 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 SASH1O94885 1247 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 MAP4P27816 1152 aaKnown RBP8.13□□□□□ -1.11
LRCH3-216ENST00000481048 UBE4AQ14139 1066 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 SUPT20HL1Q3ZLR7 823 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 LDLRAD1Q5T700 205 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 LMBR1LQ6UX01 489 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 TMEM102Q8N9M5 508 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-216ENST00000481048 OSMRQ99650 979 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 MXD3Q9BW11 206 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 SRCIN1Q9C0H9 1055 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 DEFB129Q9H1M3 183 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 CHRDQ9H2X0 955 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 C9orf78Q9NZ63 289 aaPredicted RBP8.13□□□□□ -1.11
LRCH3-216ENST00000481048 RNF114Q9Y508 228 aa8.13□□□□□ -1.11
LRCH3-216ENST00000481048 FAM205AQ6ZU69 1335 aa8.12□□□□□ -1.11
LRCH3-216ENST00000481048 F6X3S4 739 aa8.12□□□□□ -1.11
LRCH3-216ENST00000481048 SOX1O00570 391 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-216ENST00000481048 TAF5LO75529 589 aa8.12□□□□□ -1.11
LRCH3-216ENST00000481048 ZBTB48P10074 688 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-216ENST00000481048 KLRK1P26718 216 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms