RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 EIF4A1P60842 406 aaKnown RBP7.99□□□□□ -1.13
VPS50-215ENST00000480943 FAAP100Q0VG06 881 aa7.99□□□□□ -1.13
VPS50-215ENST00000480943 PDE3AQ14432 1141 aa7.99□□□□□ -1.13
VPS50-215ENST00000480943 RAD18Q9NS91 495 aa7.99□□□□□ -1.13
VPS50-215ENST00000480943 MAPK8P45983 427 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 ZNF157P51786 506 aaPredicted RBP7.98□□□□□ -1.13
VPS50-215ENST00000480943 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
VPS50-215ENST00000480943 LMOD3Q0VAK6 560 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 BNIP3Q12983 259 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.98□□□□□ -1.13
VPS50-215ENST00000480943 PRR5LQ6MZQ0 368 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 C2CD5Q86YS7 1000 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 NGEFQ8N5V2 710 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 CNBD1Q8NA66 436 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 ASB16Q96NS5 453 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 SETDB2Q96T68 719 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 GPN3Q9UHW5 284 aaPredicted RBP7.98□□□□□ -1.13
VPS50-215ENST00000480943 TSPYL4Q9UJ04 414 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 AP4E1Q9UPM8 1137 aa7.98□□□□□ -1.13
VPS50-215ENST00000480943 H0YIN7 160 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 CD8BP10966 210 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 XRCC5P13010 732 aaKnown RBP7.97□□□□□ -1.13
VPS50-215ENST00000480943 MYL6BP14649 208 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 C1QTNF8P60827 252 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 ST5P78524 1137 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 FBF1Q8TES7 1133 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 RUNDC1Q96C34 613 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 BORCS6Q96GS4 357 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 ADAMTS6Q9UKP5 1117 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 VAV3Q9UKW4 847 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 ZNF652Q9Y2D9 606 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 ACTL7BQ9Y614 415 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 TAF1P21675 1872 aa7.97□□□□□ -1.13
VPS50-215ENST00000480943 DDX60Q8IY21 1712 aaKnown RBP7.97□□□□□ -1.13
VPS50-215ENST00000480943 ZNF503-AS2A6NEH8 195 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 PDE6BP35913 854 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 HLFQ16534 295 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 C9orf131Q5VYM1 1079 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 NXPE4Q6UWF7 544 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 DYMQ7RTS9 669 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 NBPF5PQ86XG9 351 aaPredicted RBP7.96□□□□□ -1.14
VPS50-215ENST00000480943 TTLL6Q8N841 843 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 ZNF622Q969S3 477 aaKnown RBP eCLIP7.96□□□□□ -1.14
VPS50-215ENST00000480943 BRIP1Q9BX63 1249 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 RNF181Q9P0P0 153 aa7.96□□□□□ -1.14
VPS50-215ENST00000480943 NIP7Q9Y221 180 aaKnown RBP eCLIP7.96□□□□□ -1.14
VPS50-215ENST00000480943 LAS1LQ9Y4W2 734 aaKnown RBP7.96□□□□□ -1.14
VPS50-215ENST00000480943 C1QTNF9P0C862 333 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 EIF2S2P20042 333 aaKnown RBP7.95□□□□□ -1.14
VPS50-215ENST00000480943 RAB6AP20340 208 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 HNRNPUQ00839 825 aaKnown RBP eCLIP7.95□□□□□ -1.14
VPS50-215ENST00000480943 PPP2R3AQ06190 1150 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 CLEC4GQ6UXB4 293 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 KIF6Q6ZMV9 814 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 TTLL7Q6ZT98 887 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 WDR18Q9BV38 432 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 TMEM39AQ9NV64 488 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 AKAP2Q9Y2D5 859 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 MAP3K15Q6ZN16 1313 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 CACNA1FO60840 1977 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 WDR90Q96KV7 1748 aa7.95□□□□□ -1.14
VPS50-215ENST00000480943 MYH3P11055 1940 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 AOC2O75106 756 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 ANXA1P04083 346 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 HOXA5P20719 270 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 ATP2B2Q01814 1243 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 KRT24Q2M2I5 525 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 CYP27C1Q4G0S4 372 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 CIAPIN1Q6FI81 312 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 NETO1Q8TDF5 533 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 ZC3H12CQ9C0D7 883 aaKnown RBP7.94□□□□□ -1.14
VPS50-215ENST00000480943 FAM105AQ9NUU6 356 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 BABAM1Q9NWV8 329 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 ABCC12Q96J65 1359 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 SPEF2Q9C093 1822 aa7.94□□□□□ -1.14
VPS50-215ENST00000480943 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.93□□□□□ -1.14
VPS50-215ENST00000480943 APAF1O14727 1248 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 GSTP1P09211 210 aaKnown RBP7.93□□□□□ -1.14
VPS50-215ENST00000480943 GPTP24298 496 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 PRKCQQ04759 706 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 PROSER3Q2NL68 480 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 CCDC184Q52MB2 194 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 ALG1LQ6GMV1 187 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 TPTE2Q6XPS3 522 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 MASTLQ96GX5 879 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 SRCIN1Q9C0H9 1055 aa7.93□□□□□ -1.14
VPS50-215ENST00000480943 CCDC86Q9H6F5 360 aaKnown RBP7.93□□□□□ -1.14
VPS50-215ENST00000480943 ERVV-1B6SEH8 477 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 CHL1O00533 1208 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 SRGNP10124 158 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 LIG1P18858 919 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 GSTT1P30711 240 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 ASPAP45381 313 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 PRELPP51888 382 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 STYK1Q6J9G0 422 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 SLC23A3Q6PIS1 610 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 OGFOD3Q6PK18 319 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 NMRK2Q9NPI5 230 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 UBN2Q6ZU65 1347 aa7.92□□□□□ -1.14
VPS50-215ENST00000480943 SYNGAP1Q96PV0 1343 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms