RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 SYCP2LQ5T4T6 812 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 SPATA1Q5VX52 437 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 SCYL1Q96KG9 808 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 CHP1Q99653 195 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 ZSWIM5Q9P217 1185 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
COMMD4-203ENST00000480484 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 AMPD2Q01433 879 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 CYP26C1Q6V0L0 522 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
COMMD4-203ENST00000480484 ZNF34Q8IZ26 560 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 CSRNP2Q9H175 543 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 ARMT1Q9H993 441 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 ABHD10Q9NUJ1 306 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 SAR1BQ9Y6B6 198 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 MYH3P11055 1940 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 COL4A1P02462 1669 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 ANKRD36CQ5JPF3 1778 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 DLEC1Q9Y238 1755 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 FAM170AA1A519 330 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 GOLGA8AA7E2F4 631 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 MYO1FO00160 1098 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 MCM3P25205 808 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 KCNQ4P56696 695 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 SAFBQ15424 915 aaKnown RBP eCLIP11.3□□□□□ -0.6
COMMD4-203ENST00000480484 INTS5Q6P9B9 1019 aaKnown RBP11.3□□□□□ -0.6
COMMD4-203ENST00000480484 NOSTRINQ8IVI9 506 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 PAGR1Q9BTK6 254 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 CABP5Q9NP86 173 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 SUFUQ9UMX1 484 aa11.3□□□□□ -0.6
COMMD4-203ENST00000480484 SARSP49591 514 aaKnown RBP11.29□□□□□ -0.6
COMMD4-203ENST00000480484 GSCP56915 257 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-203ENST00000480484 DIS3L2Q8IYB7 885 aaKnown RBP11.29□□□□□ -0.6
COMMD4-203ENST00000480484 CTAGE1Q96RT6 745 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 TAB2Q9NYJ8 693 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 AGPSO00116 658 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 SH2B2O14492 632 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-203ENST00000480484 NDUFAB1O14561 156 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 ZNF185O15231 689 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 ZBTB43O43298 467 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 KIAA0754O94854 1291 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 CRKLP46109 303 aaKnown RBP11.29□□□□□ -0.6
COMMD4-203ENST00000480484 ITPK1Q13572 414 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 RASGRF1Q13972 1273 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 CCDC122Q5T0U0 273 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 FBXL16Q8N461 479 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 IGDCC4Q8TDY8 1250 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 PLIN2Q99541 437 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 SENP7Q9BQF6 1050 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.29□□□□□ -0.6
COMMD4-203ENST00000480484 LY9Q9HBG7 655 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 SMARCAL1Q9NZC9 954 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 SWAP70Q9UH65 585 aa11.29□□□□□ -0.6
COMMD4-203ENST00000480484 TCRBV5S4A2TA0A5A2 114 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 TTC36A6NLP5 189 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 ZEB2O60315 1214 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 MATR3P43243 847 aaKnown RBP eCLIP11.28□□□□□ -0.6
COMMD4-203ENST00000480484 PPFIA1Q13136 1202 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 GBP6Q6ZN66 633 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 TRIML1Q8N9V2 468 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 LRRC27Q9C0I9 530 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 JADE2Q9NQC1 790 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 VPS54Q9P1Q0 977 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 FBXO2Q9UK22 296 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-203ENST00000480484 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 C4AP0C0L4 1744 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 C4BP0C0L5 1744 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 SCAMP3O14828 347 aaKnown RBP11.28□□□□□ -0.6
COMMD4-203ENST00000480484 HSPA1LP34931 641 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 IL6STP40189 918 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-203ENST00000480484 C2orf54Q08AI8 447 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 NT5DC1Q5TFE4 455 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 OTUD6BQ8N6M0 293 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 CENPHQ9H3R5 247 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 MYO1AQ9UBC5 1043 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 EPN1Q9Y6I3 576 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-203ENST00000480484 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
COMMD4-203ENST00000480484 FGFR2P21802 821 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 SCP2P22307 547 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 PTPREP23469 700 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 PBX1P40424 430 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 BCAMP50895 628 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 ATP1A2P50993 1020 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 SSRP1Q08945 709 aaKnown RBP11.28□□□□□ -0.6
COMMD4-203ENST00000480484 KRT31Q15323 416 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 TMEM67Q5HYA8 995 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 KIAA1328Q86T90 577 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 JAKMIP2Q96AA8 810 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 CCDC51Q96ER9 411 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
COMMD4-203ENST00000480484 RUFY1Q96T51 708 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 DUSP10Q9Y6W6 482 aa11.28□□□□□ -0.6
COMMD4-203ENST00000480484 DYTNA2CJ06 578 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms