RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 SLC40A1Q9NP59 571 aa15.05■□□□□ -0
C9orf78-205ENST00000480023 TNS2Q63HR2 1409 aa15.05■□□□□ -0
C9orf78-205ENST00000480023 MYH3P11055 1940 aa15.05■□□□□ -0
C9orf78-205ENST00000480023 BICDL2A1A5D9 508 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 GLI1P08151 1106 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 FGFR2P21802 821 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 MATR3P43243 847 aaKnown RBP eCLIP15.04■□□□□ -0
C9orf78-205ENST00000480023 CFAP221Q4G0U5 840 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 CEP85LQ5SZL2 805 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 LCORLQ8N3X6 602 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 GREM2Q9H772 168 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 CNNM1Q9NRU3 951 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 SLC4A4Q9Y6R1 1079 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 RREB1Q92766 1687 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 ANKRD18BA2A2Z9 1011 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 PLEKHA8P1O95397 391 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 PLEKP08567 350 aaPredicted RBP15.04■□□□□ -0
C9orf78-205ENST00000480023 CALM1P0DP23 149 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 CALM2P0DP24 149 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 CALM3P0DP25 149 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 CCNE1P24864 410 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 CARSP49589 748 aaKnown RBP15.04■□□□□ -0
C9orf78-205ENST00000480023 MRPS25P82663 173 aaKnown RBP15.04■□□□□ -0
C9orf78-205ENST00000480023 TMTC3Q6ZXV5 915 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 ARFGAP2Q8N6H7 521 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 ENAHQ8N8S7 591 aaPredicted RBP15.04■□□□□ -0
C9orf78-205ENST00000480023 EIF1ADQ8N9N8 165 aaKnown RBP15.04■□□□□ -0
C9orf78-205ENST00000480023 LPIN2Q92539 896 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 CNOT6LQ96LI5 555 aaKnown RBP15.04■□□□□ -0
C9orf78-205ENST00000480023 KBTBD4Q9NVX7 518 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 NFU1Q9UMS0 254 aa15.04■□□□□ -0
C9orf78-205ENST00000480023 CNTNAP5Q8WYK1 1306 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 GOLGA6L7A0A1B0GV03 622 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 FAM153BP0C7A2 387 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 NF2P35240 595 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 PPP1R2P41236 205 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 TROAPQ12815 778 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 IFT88Q13099 833 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 PUM3Q15397 648 aaKnown RBP15.03■□□□□ -0
C9orf78-205ENST00000480023 FAM153CQ494X1 144 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 RNF187Q5TA31 235 aaPredicted RBP15.03■□□□□ -0
C9orf78-205ENST00000480023 KRT28Q7Z3Y7 464 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 TAX1BP1Q86VP1 789 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 RNF10Q8N5U6 811 aaKnown RBP15.03■□□□□ -0
C9orf78-205ENST00000480023 MIEF2Q96C03 454 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
C9orf78-205ENST00000480023 CYFIP2Q96F07 1278 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 SMARCAL1Q9NZC9 954 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 EHD2Q9NZN4 543 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 FAM153AQ9UHL3 310 aa15.03■□□□□ -0
C9orf78-205ENST00000480023 CXCR5P32302 372 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 MCM7P33993 719 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 HSPA9P38646 679 aaKnown RBP15.02■□□□□ -0
C9orf78-205ENST00000480023 CDR1P51861 262 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 SEC24CP53992 1094 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 CTSWP56202 376 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 KLHDC7AQ5VTJ3 777 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 LRIG3Q6UXM1 1119 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 PIK3AP1Q6ZUJ8 805 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 CATIPQ7Z7H3 387 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 P2RX5Q93086 422 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 ZSCAN10Q96SZ4 725 aaPredicted RBP15.02■□□□□ -0
C9orf78-205ENST00000480023 VEZTQ9HBM0 779 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 ODF2LQ9ULJ1 636 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 DUOX1Q9NRD9 1551 aa15.02■□□□□ -0
C9orf78-205ENST00000480023 hCG_1642624A0A1W2PR95 340 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 GRID2IPA4D2P6 1211 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 ERVV-2B6SEH9 535 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 DDAH1O94760 285 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 HEXIM1O94992 359 aaKnown RBP15.02□□□□□ -0.01
C9orf78-205ENST00000480023 RASGRF1Q13972 1273 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 SNCBQ16143 134 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 FKBP15Q5T1M5 1219 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 TYW1BQ6NUM6 668 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 IQCA1Q86XH1 822 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 NOC4LQ9BVI4 516 aaKnown RBP15.02□□□□□ -0.01
C9orf78-205ENST00000480023 TMBIM4Q9HC24 238 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 SIK3Q9Y2K2 1263 aa15.02□□□□□ -0.01
C9orf78-205ENST00000480023 GCFC2P16383 781 aaKnown RBP15.01□□□□□ -0.01
C9orf78-205ENST00000480023 EIF4A3P38919 411 aaKnown RBP15.01□□□□□ -0.01
C9orf78-205ENST00000480023 COBLL1Q53SF7 1204 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 CYB5D1Q6P9G0 228 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 CCDC121Q6ZUS5 278 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 FUKQ8N0W3 1084 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 N4BP2L2Q92802 583 aaPredicted RBP15.01□□□□□ -0.01
C9orf78-205ENST00000480023 SGSM3Q96HU1 749 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 NOX5Q96PH1 765 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 CCSER1Q9C0I3 900 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 MAGEF1Q9HAY2 307 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 EPB41L5Q9HCM4 733 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 PLCB1Q9NQ66 1216 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 SLC12A6Q9UHW9 1150 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 SALL4Q9UJQ4 1053 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 CCDC189A1A4V9 331 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 C5orf60A6NFR6 353 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 E7EVH7 732 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 ASTE1Q2TB18 679 aaPredicted RBP15.01□□□□□ -0.01
C9orf78-205ENST00000480023 C2CD5Q86YS7 1000 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 PARP9Q8IXQ6 854 aa15.01□□□□□ -0.01
C9orf78-205ENST00000480023 P3H4Q92791 437 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms