RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 MYH2Q9UKX2 1941 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 RHOBTB3O94955 611 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 RASSF7Q02833 373 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 INF2Q27J81 1249 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 EMBQ6PCB8 327 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 BLIDQ8IZY5 108 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 ZBTB1Q9Y2K1 713 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 KAT6BQ8WYB5 2073 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 CALM1P0DP23 149 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 CALM2P0DP24 149 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 CALM3P0DP25 149 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 MAP2K2P36507 400 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 ASIC1P78348 528 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 GUCY2DQ02846 1103 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 CFAP58Q5T655 872 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 ALS2CLQ60I27 953 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 ARL6IP4Q66PJ3 421 aaKnown RBP23.01■■□□□ 1.27
COL13A1-208ENST00000479733 RRAGAQ7L523 313 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 RETREG2Q8NC44 543 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 ALS2CR12Q96Q35 445 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 EPB41L5Q9HCM4 733 aa23.01■■□□□ 1.27
COL13A1-208ENST00000479733 IL2RBP14784 551 aa23■■□□□ 1.27
COL13A1-208ENST00000479733 MAGEA1P43355 309 aa23■■□□□ 1.27
COL13A1-208ENST00000479733 GYG1P46976 350 aa23■■□□□ 1.27
COL13A1-208ENST00000479733 KCNB1Q14721 858 aa23■■□□□ 1.27
COL13A1-208ENST00000479733 PFKFB3Q16875 520 aaPredicted RBP23■■□□□ 1.27
COL13A1-208ENST00000479733 B4GALNT4Q76KP1 1039 aa23■■□□□ 1.27
COL13A1-208ENST00000479733 CCDC194A0A1B0GVG4 234 aa22.99■■□□□ 1.27
COL13A1-208ENST00000479733 TCP1P17987 556 aaKnown RBP22.99■■□□□ 1.27
COL13A1-208ENST00000479733 LSP1P33241 339 aa22.99■■□□□ 1.27
COL13A1-208ENST00000479733 TRADDQ15628 312 aa22.99■■□□□ 1.27
COL13A1-208ENST00000479733 MYH13Q9UKX3 1938 aa22.99■■□□□ 1.27
COL13A1-208ENST00000479733 ZNF233A6NK53 670 aa22.99■■□□□ 1.27
COL13A1-208ENST00000479733 CCNE1P24864 410 aa22.99■■□□□ 1.27
COL13A1-208ENST00000479733 SKOR1P84550 965 aa22.99■■□□□ 1.27
COL13A1-208ENST00000479733 GFPT1Q06210 699 aaPredicted RBP22.99■■□□□ 1.27
COL13A1-208ENST00000479733 MEFVO15553 781 aaPredicted RBP22.98■■□□□ 1.27
COL13A1-208ENST00000479733 USP8P40818 1118 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 DHTKD1Q96HY7 919 aaPredicted RBP22.98■■□□□ 1.27
COL13A1-208ENST00000479733 SLC39A2Q9NP94 309 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 ANAPC4Q9UJX5 808 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 PLCG1P19174 1290 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 CNPY4Q8N129 248 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 MTMR8Q96EF0 704 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 CXorf56Q9H5V9 222 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 KBTBD4Q9NVX7 518 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 PLAGL2Q9UPG8 496 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 DDAH1O94760 285 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 HEXIM1O94992 359 aaKnown RBP22.98■■□□□ 1.27
COL13A1-208ENST00000479733 EPB41P11171 864 aaKnown RBP22.98■■□□□ 1.27
COL13A1-208ENST00000479733 HPDP32754 393 aaPredicted RBP22.98■■□□□ 1.27
COL13A1-208ENST00000479733 NKX1-1Q15270 411 aaPredicted RBP22.98■■□□□ 1.27
COL13A1-208ENST00000479733 PRPF38AQ8NAV1 312 aaKnown RBP22.98■■□□□ 1.27
COL13A1-208ENST00000479733 TLR10Q9BXR5 811 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 CD248Q9HCU0 757 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 DISP2A7MBM2 1401 aa22.98■■□□□ 1.27
COL13A1-208ENST00000479733 PARP4Q9UKK3 1724 aaKnown RBP22.98■■□□□ 1.27
COL13A1-208ENST00000479733 LRRC53A6NM62 1247 aa22.97■■□□□ 1.27
COL13A1-208ENST00000479733 SETQ01105 290 aaPredicted RBP22.97■■□□□ 1.27
COL13A1-208ENST00000479733 NAA35Q5VZE5 725 aa22.97■■□□□ 1.27
COL13A1-208ENST00000479733 TIAM2Q8IVF5 1701 aa22.97■■□□□ 1.27
COL13A1-208ENST00000479733 CABS1Q96KC9 395 aa22.97■■□□□ 1.27
COL13A1-208ENST00000479733 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
COL13A1-208ENST00000479733 DZIP3Q86Y13 1208 aaKnown RBP22.97■■□□□ 1.27
COL13A1-208ENST00000479733 NOC3LQ8WTT2 800 aaKnown RBP22.97■■□□□ 1.27
COL13A1-208ENST00000479733 RIOK1Q9BRS2 568 aaKnown RBP22.97■■□□□ 1.27
COL13A1-208ENST00000479733 IFT88Q13099 833 aa22.96■■□□□ 1.27
COL13A1-208ENST00000479733 PACSIN2Q9UNF0 486 aaPredicted RBP22.96■■□□□ 1.27
COL13A1-208ENST00000479733 BICDL2A1A5D9 508 aa22.96■■□□□ 1.27
COL13A1-208ENST00000479733 CYP2D6P10635 497 aa22.96■■□□□ 1.27
COL13A1-208ENST00000479733 FNTAP49354 379 aa22.96■■□□□ 1.27
COL13A1-208ENST00000479733 ENOX2Q16206 610 aaKnown RBP22.96■■□□□ 1.27
COL13A1-208ENST00000479733 TDRD12Q587J7 1177 aaKnown RBP22.96■■□□□ 1.27
COL13A1-208ENST00000479733 FAM114A1Q8IWE2 563 aa22.96■■□□□ 1.27
COL13A1-208ENST00000479733 IFT20Q8IY31 132 aa22.96■■□□□ 1.27
COL13A1-208ENST00000479733 CCDC155Q8N6L0 562 aa22.96■■□□□ 1.27
COL13A1-208ENST00000479733 CAVIN3Q969G5 261 aa22.96■■□□□ 1.27
COL13A1-208ENST00000479733 FTCDO95954 541 aa22.95■■□□□ 1.27
COL13A1-208ENST00000479733 SLC1A4P43007 532 aa22.95■■□□□ 1.27
COL13A1-208ENST00000479733 MAATS1Q7Z4T9 603 aa22.95■■□□□ 1.27
COL13A1-208ENST00000479733 STAG2Q8N3U4 1231 aa22.95■■□□□ 1.27
COL13A1-208ENST00000479733 ERGIC2Q96RQ1 377 aa22.95■■□□□ 1.27
COL13A1-208ENST00000479733 PPANQ9NQ55 473 aaKnown RBP22.95■■□□□ 1.27
COL13A1-208ENST00000479733 COL18A1P39060 1754 aa22.95■■□□□ 1.27
COL13A1-208ENST00000479733 NR1D1P20393 614 aa22.95■■□□□ 1.26
COL13A1-208ENST00000479733 HDLBPQ00341 1268 aaKnown RBP22.95■■□□□ 1.26
COL13A1-208ENST00000479733 KRT12Q99456 494 aa22.95■■□□□ 1.26
COL13A1-208ENST00000479733 TSPY2A6NKD2 308 aa22.95■■□□□ 1.26
COL13A1-208ENST00000479733 TXNRD1Q16881 649 aa22.95■■□□□ 1.26
COL13A1-208ENST00000479733 SUSD4Q5VX71 490 aa22.95■■□□□ 1.26
COL13A1-208ENST00000479733 ZNF473Q8WTR7 871 aaKnown RBP22.95■■□□□ 1.26
COL13A1-208ENST00000479733 TRIM9Q9C026 710 aa22.95■■□□□ 1.26
COL13A1-208ENST00000479733 EPN3Q9H201 632 aa22.95■■□□□ 1.26
COL13A1-208ENST00000479733 E7EVH7 732 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 PRLRP16471 622 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 CALML3P27482 149 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 ITIH3Q06033 890 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 CHRNDQ07001 517 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 CFAP221Q4G0U5 840 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 KLHDC7AQ5VTJ3 777 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms