RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	KCTD1	Q719H9	257 aa		5	□□□□□ -1.61
POLR2B-208	ENST00000478188	NBPF11	Q86T75	865 aa		5	□□□□□ -1.61
POLR2B-208	ENST00000478188	FAM160B2	Q86V87	743 aa		5	□□□□□ -1.61
POLR2B-208	ENST00000478188	KRI1	Q8N9T8	703 aa	Known RBP	5	□□□□□ -1.61
POLR2B-208	ENST00000478188	TEX13B	Q9BXU2	312 aa		5	□□□□□ -1.61
POLR2B-208	ENST00000478188	ADGRG1	Q9Y653	693 aa		5	□□□□□ -1.61
POLR2B-208	ENST00000478188	PTPRS	Q13332	1948 aa		5	□□□□□ -1.61
POLR2B-208	ENST00000478188	SCN10A	Q9Y5Y9	1956 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	SI	P14410	1827 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	TSPY2	A6NKD2	308 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	PPP1R11	O60927	126 aa	Predicted RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	KDM4A	O75164	1064 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	SNAI1	O95863	264 aa	Predicted RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	COPB2	P35606	906 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	STAT3	P40763	770 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	CCNA1	P78396	465 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	TSGA10IP	Q3SY00	556 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	MUM1L1	Q5H9M0	696 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	MFSD6	Q6ZSS7	791 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	ANKLE1	Q8NAG6	615 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	IGDCC4	Q8TDY8	1250 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	MAD2L2	Q9UI95	211 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	RBM8A	Q9Y5S9	174 aa	Known RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	TNKS	O95271	1327 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	WDR19	Q8NEZ3	1342 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	WDR81	Q562E7	1941 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	PALM3	A6NDB9	673 aa	Predicted RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	TMEM232	C9JQI7	657 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	ZNF213	O14771	459 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	SLC27A2	O14975	620 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	RANBP6	O60518	1105 aa	Known RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	ICAM1	P05362	532 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	FDX1	P10109	184 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	ZKSCAN1	P17029	563 aa	Predicted RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	MCC	P23508	829 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	STAT2	P52630	851 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	UBXN2A	P68543	259 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	ATP2B2	Q01814	1243 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	SWT1	Q5T5J6	900 aa	Known RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	SNRNP48	Q6IEG0	339 aa	Known RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	IL17RA	Q96F46	866 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	AGBL1	Q96MI9	1066 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	ZKSCAN3	Q9BRR0	538 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	RNF41	Q9H4P4	317 aa	Predicted RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	RAVER2	Q9HCJ3	691 aa	Known RBP	4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	NRBP1	Q9UHY1	535 aa		4.99	□□□□□ -1.61
POLR2B-208	ENST00000478188	PGK2	P07205	417 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	SNAP25	P60880	206 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	TROAP	Q12815	778 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	SNX17	Q15036	470 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	TKFC	Q3LXA3	575 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	SYDE2	Q5VT97	1194 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	MSL3	Q8N5Y2	521 aa	Known RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	CHST13	Q8NET6	341 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	ESR2	Q92731	530 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	MMP19	Q99542	508 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	COL25A1	Q9BXS0	654 aa	Predicted RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	PRKD2	Q9BZL6	878 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	UPF3A	Q9H1J1	476 aa	Known RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	LY9	Q9HBG7	655 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	A1CF	Q9NQ94	594 aa	Known RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	FRMPD4	Q14CM0	1322 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	SH2B2	O14492	632 aa	Predicted RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	CYTH3	O43739	400 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	GFRA3	O60609	400 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	ADAMTS4	O75173	837 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	EDNRB	P24530	442 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	CYP2C19	P33261	490 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	GRM4	Q14833	912 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	IMMT	Q16891	758 aa	Known RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	CREB3L3	Q68CJ9	461 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	STAG2	Q8N3U4	1231 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	KIFC2	Q96AC6	838 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	FAM122A	Q96E09	287 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	DEFB118	Q96PH6	123 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	MTA3	Q9BTC8	594 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	RNF208	Q9H0X6	261 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	CPVL	Q9H3G5	476 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	CNNM2	Q9H8M5	875 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	CYP39A1	Q9NYL5	469 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	DDX20	Q9UHI6	824 aa	Known RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	CTNNA3	Q9UI47	895 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188		V9GY48	417 aa	Predicted RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	PDE4DIP	Q5VU43	2346 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	OAT	P04181	439 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	FCER1A	P12319	257 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	SLC16A2	P36021	539 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	SLC1A4	P43007	532 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	EXOSC10	Q01780	885 aa	Known RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	ERICH6B	Q5W0A0	696 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	PPP1R18	Q6NYC8	613 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	SLC30A10	Q6XR72	485 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	NCAPG2	Q86XI2	1143 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	PNMA1	Q8ND90	353 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	KLHDC9	Q8NEP7	349 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	KRT23	Q9C075	422 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 60 ms