RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 ZNF865P0CJ78 1059 aaPredicted RBP9.7□□□□□ -0.86
ERCC8-205ENST00000477893 FDX1P10109 184 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 COL6A1P12109 1028 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 AKR1A1P14550 325 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 CALML3P27482 149 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 ADCYAP1R1P41586 468 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 TRDNQ13061 729 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 LRRC41Q15345 812 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 IFIT1BQ5T764 474 aaKnown RBP9.7□□□□□ -0.86
ERCC8-205ENST00000477893 NOL8Q76FK4 1167 aaKnown RBP9.7□□□□□ -0.86
ERCC8-205ENST00000477893 ARMCX2Q7L311 632 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 EEPD1Q7L9B9 569 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 RALYLQ86SE5 291 aaKnown RBP9.7□□□□□ -0.86
ERCC8-205ENST00000477893 CCDC144CPQ8IYA2 1237 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 ARRDC4Q8NCT1 418 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 CNNM2Q9H8M5 875 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 VAT1LQ9HCJ6 419 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 ZSWIM5Q9P217 1185 aa9.7□□□□□ -0.86
ERCC8-205ENST00000477893 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
ERCC8-205ENST00000477893 DIS3Q9Y2L1 958 aaKnown RBP9.7□□□□□ -0.86
ERCC8-205ENST00000477893 SOWAHBA6NEL2 793 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 PLA2G6O60733 806 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 CAPN2P17655 700 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 PTGS1P23219 599 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 FOSBP53539 338 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 RTP1P59025 263 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 ACVR2BQ13705 512 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 BAATQ14032 418 aaPredicted RBP9.69□□□□□ -0.86
ERCC8-205ENST00000477893 TKFCQ3LXA3 575 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 BTNL9Q6UXG8 535 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 SLC30A10Q6XR72 485 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 STOX1Q6ZVD7 989 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 DGKHQ86XP1 1220 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 FBXO16Q8IX29 292 aaPredicted RBP9.69□□□□□ -0.86
ERCC8-205ENST00000477893 CCDC136Q96JN2 1154 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 TTC14Q96N46 770 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 SYNGAP1Q96PV0 1343 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 ANO2Q9NQ90 1003 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 PRDM5Q9NQX1 630 aaPredicted RBP9.69□□□□□ -0.86
ERCC8-205ENST00000477893 CYP39A1Q9NYL5 469 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 ZNFX1Q9P2E3 1918 aaKnown RBP9.69□□□□□ -0.86
ERCC8-205ENST00000477893 SYNRGQ9UMZ2 1314 aa9.69□□□□□ -0.86
ERCC8-205ENST00000477893 RBM8AQ9Y5S9 174 aaKnown RBP9.69□□□□□ -0.86
ERCC8-205ENST00000477893 RANBP2P49792 3224 aaKnown RBP9.68□□□□□ -0.86
ERCC8-205ENST00000477893 ASTN1O14525 1302 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.68□□□□□ -0.86
ERCC8-205ENST00000477893 MYADML2A6NDP7 307 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 E7EWF7 191 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 IFIT3O14879 490 aaKnown RBP9.68□□□□□ -0.86
ERCC8-205ENST00000477893 ADCY6O43306 1168 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 NEFLP07196 543 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 PARP1P09874 1014 aaKnown RBP9.68□□□□□ -0.86
ERCC8-205ENST00000477893 SNHG28P0DPA3 235 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
ERCC8-205ENST00000477893 CDC37Q16543 378 aaPredicted RBP9.68□□□□□ -0.86
ERCC8-205ENST00000477893 CCDC144BQ3MJ40 725 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 TRIM60Q495X7 471 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 CCDC178Q5BJE1 867 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 GPATCH4Q5T3I0 446 aaKnown RBP9.68□□□□□ -0.86
ERCC8-205ENST00000477893 KIAA1211Q6ZU35 1233 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 RNF180Q86T96 592 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 FAM133AQ8N9E0 248 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 ESYT1Q9BSJ8 1104 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 NRBP1Q9UHY1 535 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 FAM184BQ9ULE4 1060 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 TRIOBPQ9H2D6 2365 aa9.68□□□□□ -0.86
ERCC8-205ENST00000477893 ERICH2A1L162 156 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 C6orf222P0C671 652 aaPredicted RBP9.67□□□□□ -0.86
ERCC8-205ENST00000477893 MAGEA10P43363 369 aaPredicted RBP9.67□□□□□ -0.86
ERCC8-205ENST00000477893 WTAPQ15007 396 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 ASPRV1Q53RT3 343 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 TMEM67Q5HYA8 995 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 MAMDC4Q6UXC1 1216 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 RNF207Q6ZRF8 634 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 HOMER1Q86YM7 354 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 ADGRF4Q8IZF3 695 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 STAG2Q8N3U4 1231 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 MSL3Q8N5Y2 521 aaKnown RBP9.67□□□□□ -0.86
ERCC8-205ENST00000477893 NCOA7Q8NI08 942 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 PIBF1Q8WXW3 757 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 LSG1Q9H089 658 aaKnown RBP9.67□□□□□ -0.86
ERCC8-205ENST00000477893 ABHD16BQ9H3Z7 469 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 PDGFCQ9NRA1 345 aa9.67□□□□□ -0.86
ERCC8-205ENST00000477893 LRRC37A2A6NM11 1700 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 A0A1W2PQ45 241 aaPredicted RBP9.66□□□□□ -0.86
ERCC8-205ENST00000477893 A0A1W2PQY0 241 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 ASB14A6NK59 587 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 PQBP1O60828 265 aaKnown RBP9.66□□□□□ -0.86
ERCC8-205ENST00000477893 ADAMTS4O75173 837 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 FXR1P51114 621 aaKnown RBP eCLIP9.66□□□□□ -0.86
ERCC8-205ENST00000477893 ALDH5A1P51649 535 aaPredicted RBP9.66□□□□□ -0.86
ERCC8-205ENST00000477893 ANTXR2P58335 489 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 BEX3Q00994 111 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 SART3Q15020 963 aaKnown RBP9.66□□□□□ -0.86
ERCC8-205ENST00000477893 SEC23AQ15436 765 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 QRICH1Q2TAL8 776 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 TMEM63BQ5T3F8 832 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 SLC39A5Q6ZMH5 540 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms