RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 RCCD1A6NED2 376 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 BMP15O95972 392 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 MAGEA1P43355 309 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 CACNB3P54284 484 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 GNGT1P63211 74 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 PPANQ9NQ55 473 aaKnown RBP10.86□□□□□ -0.67
CMC1-209ENST00000477739 FEZ2Q9UHY8 353 aaPredicted RBP10.86□□□□□ -0.67
CMC1-209ENST00000477739 SPATA31A5Q5VU36 1347 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 SPATA31A7Q8IWB4 1347 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 CHMP2AO43633 222 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 TOM1O60784 492 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 ZNF18P17022 549 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 SCNN1DP51172 638 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 MDM2Q00987 491 aaPredicted RBP10.86□□□□□ -0.67
CMC1-209ENST00000477739 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 SEC23AQ15436 765 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 TMTC3Q6ZXV5 915 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 USO1O60763 962 aaKnown RBP10.86□□□□□ -0.67
CMC1-209ENST00000477739 EIF4A3P38919 411 aaKnown RBP10.86□□□□□ -0.67
CMC1-209ENST00000477739 GUCY2DQ02846 1103 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 SH3RF3Q8TEJ3 882 aaPredicted RBP10.86□□□□□ -0.67
CMC1-209ENST00000477739 SNX29Q8TEQ0 813 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 CALML4Q96GE6 196 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 GSDMAQ96QA5 445 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 PIGSQ96S52 555 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 MTRQ99707 1265 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 LRRC1Q9BTT6 524 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 GBP3Q9H0R5 595 aa10.86□□□□□ -0.67
CMC1-209ENST00000477739 ARPP21Q9UBL0 812 aaPredicted RBP10.86□□□□□ -0.67
CMC1-209ENST00000477739 KRT14P02533 472 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 ERCC5P28715 1186 aaPredicted RBP10.85□□□□□ -0.67
CMC1-209ENST00000477739 USH1GQ495M9 461 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 BEND6Q5SZJ8 279 aaPredicted RBP10.85□□□□□ -0.67
CMC1-209ENST00000477739 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 CNBD1Q8NA66 436 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 FAM76AQ8TAV0 307 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 ATP8A2Q9NTI2 1148 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 NUP188Q5SRE5 1749 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 SPEF2Q9C093 1822 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 DISP2A7MBM2 1401 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 NPHP3-ACAD11A0A0J9YXS1 232 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 DDAH1O94760 285 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 GTF2A1P52655 376 aaPredicted RBP10.85□□□□□ -0.67
CMC1-209ENST00000477739 POLR2FP61218 127 aaKnown RBP10.85□□□□□ -0.67
CMC1-209ENST00000477739 UBXN2AP68543 259 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 TROAPQ12815 778 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 IL17AQ16552 155 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 ANKRD40Q6AI12 368 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 MB21D1Q8N884 522 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 FERMT2Q96AC1 680 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 CHORDC1Q9UHD1 332 aaPredicted RBP10.85□□□□□ -0.67
CMC1-209ENST00000477739 NARFQ9UHQ1 456 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 DMGDHQ9UI17 866 aaKnown RBP10.85□□□□□ -0.67
CMC1-209ENST00000477739 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 NDUFAB1O14561 156 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
CMC1-209ENST00000477739 BUB1BO60566 1050 aaPredicted RBP10.85□□□□□ -0.67
CMC1-209ENST00000477739 SPAG1Q07617 926 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 ADCY1Q08828 1119 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 BRD3Q15059 726 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 C8orf74Q6P047 294 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 TBCKQ8TEA7 893 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 AP1M1Q9BXS5 423 aa10.85□□□□□ -0.67
CMC1-209ENST00000477739 LAMA4Q16363 1823 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 TACC1O75410 805 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 ABCB4P21439 1286 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 NBPF9Q3BBW0 867 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 TTC31Q49AM3 519 aaPredicted RBP10.84□□□□□ -0.67
CMC1-209ENST00000477739 POTEDQ86YR6 584 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 SPAG5Q96R06 1193 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 MTA3Q9BTC8 594 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 SELENOOQ9BVL4 669 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 RMND1Q9NWS8 449 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 NFU1Q9UMS0 254 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 CAPN6Q9Y6Q1 641 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 PDE2AO00408 941 aaPredicted RBP10.84□□□□□ -0.67
CMC1-209ENST00000477739 CALML3P27482 149 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 ZYXQ15942 572 aaKnown RBP10.84□□□□□ -0.67
CMC1-209ENST00000477739 GRIK5Q16478 980 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 FBXO33Q7Z6M2 555 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 FNBP4Q8N3X1 1017 aaPredicted RBP10.84□□□□□ -0.67
CMC1-209ENST00000477739 OR2W6PQ8NHA6 318 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 ARHGEF1Q92888 912 aaKnown RBP10.84□□□□□ -0.67
CMC1-209ENST00000477739 PANX2Q96RD6 677 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 KRT12Q99456 494 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 DPH5Q9H2P9 285 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 DISC1Q9NRI5 854 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 SEMA3EO15041 775 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 RPS6KA4O75676 772 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 UFL1O94874 794 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 TDP2O95551 362 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 LDHCP07864 332 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 ZFYVE27Q5T4F4 411 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 KCTD1Q719H9 257 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 ZNF804AQ7Z570 1209 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 TEX11Q8IYF3 940 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 WDR66Q8TBY9 1149 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 SH2D3AQ9BRG2 576 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 PHF20Q9BVI0 1012 aa10.84□□□□□ -0.67
CMC1-209ENST00000477739 ADAMTS1Q9UHI8 967 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms