RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TNNI2P48788 182 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 COBLL1Q53SF7 1204 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 HS1BP3Q53T59 392 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.79□□□□□ -0.2
PRPF39-203ENST00000477626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRPF39-203ENST00000477626 GRAMD1CQ8IYS0 662 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 CUL5Q93034 780 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 ARHGEF10LQ9HCE6 1279 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 BLOC1S4Q9NUP1 217 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 TMEM232C9JQI7 657 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 WDR46O15213 610 aaKnown RBP13.79□□□□□ -0.2
PRPF39-203ENST00000477626 DDNO94850 711 aaPredicted RBP13.79□□□□□ -0.2
PRPF39-203ENST00000477626 SNAP25P60880 206 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 POSTNQ15063 836 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 AK8Q96MA6 479 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 DISC1Q9NRI5 854 aa13.79□□□□□ -0.2
PRPF39-203ENST00000477626 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
PRPF39-203ENST00000477626 VCAM1P19320 739 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 GRB10Q13322 594 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 PDIA5Q14554 519 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 ADARB2Q9NS39 739 aaKnown RBP13.78□□□□□ -0.2
PRPF39-203ENST00000477626 GGA3Q9NZ52 723 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 FAM86B1E9PN63 330 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 IKBKBO14920 756 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
PRPF39-203ENST00000477626 FAM86B2P0C5J1 330 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 CDC25BP30305 580 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 DLK2Q6UY11 383 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 AMNQ9BXJ7 453 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 PPP1R3GB7ZBB8 358 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 ICAM1P05362 532 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 USP17L6PQ6QN14 398 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 ZNF341Q9BYN7 854 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 VAT1LQ9HCJ6 419 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 FBXO28Q9NVF7 368 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 FZD1Q9UP38 647 aa13.78□□□□□ -0.2
PRPF39-203ENST00000477626 ZSWIM8A7E2V4 1837 aa13.77□□□□□ -0.2
PRPF39-203ENST00000477626 VWA3AA6NCI4 1184 aa13.77□□□□□ -0.2
PRPF39-203ENST00000477626 FAM160B2Q86V87 743 aa13.77□□□□□ -0.2
PRPF39-203ENST00000477626 SPICE1Q8N0Z3 855 aa13.77□□□□□ -0.2
PRPF39-203ENST00000477626 NUDT12Q9BQG2 462 aa13.77□□□□□ -0.2
PRPF39-203ENST00000477626 SLC26A4O43511 780 aa13.77□□□□□ -0.21
PRPF39-203ENST00000477626 TRIML1Q8N9V2 468 aa13.77□□□□□ -0.21
PRPF39-203ENST00000477626 GLT8D2Q9H1C3 349 aa13.77□□□□□ -0.21
PRPF39-203ENST00000477626 BACE1P56817 501 aa13.77□□□□□ -0.21
PRPF39-203ENST00000477626 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRPF39-203ENST00000477626 TBC1D5Q92609 795 aa13.77□□□□□ -0.21
PRPF39-203ENST00000477626 INTS13Q9NVM9 706 aa13.77□□□□□ -0.21
PRPF39-203ENST00000477626 NEMFO60524 1076 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 JAKMIP3Q5VZ66 844 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 RNF214Q8ND24 703 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 ANO3Q9BYT9 981 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 GCFC2P16383 781 aaKnown RBP13.76□□□□□ -0.21
PRPF39-203ENST00000477626 CT47A1Q5JQC4 288 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-203ENST00000477626 FBXO11Q86XK2 927 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 MAF1Q9H063 256 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 PPP1R9AQ9ULJ8 1098 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 GJA3Q9Y6H8 435 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 CCDC194A0A1B0GVG4 234 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 CCNT1O60563 726 aaKnown RBP13.76□□□□□ -0.21
PRPF39-203ENST00000477626 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 CCDC96Q2M329 555 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 ZKSCAN4Q969J2 545 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-203ENST00000477626 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
PRPF39-203ENST00000477626 IRF6O14896 467 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 C9orf131Q5VYM1 1079 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 MCTP2Q6DN12 878 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 LBX2Q6XYB7 198 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 KCNF1Q9H3M0 494 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 ZNF214Q9UL59 606 aaPredicted RBP13.75□□□□□ -0.21
PRPF39-203ENST00000477626 FRMD3A2A2Y4 597 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 TBX3O15119 743 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 GNL2Q13823 731 aaKnown RBP13.75□□□□□ -0.21
PRPF39-203ENST00000477626 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 PCDHA2Q9Y5H9 948 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 PCNTO95613 3336 aa13.75□□□□□ -0.21
PRPF39-203ENST00000477626 ZNF165P49910 485 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
PRPF39-203ENST00000477626 ANO10Q9NW15 660 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 ASTN1O14525 1302 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 ABCB11O95342 1321 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 SPATA31C1P0DKV0 1188 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 CASP1P29466 404 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 SAMD3Q8N6K7 520 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 C7orf25Q9BPX7 421 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms