RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 CFHP08603 1231 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 SLC10A3P09131 477 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 MARCKSP29966 332 aaPredicted RBP7.58□□□□□ -1.2
LDB3-206ENST00000477489 MRPL12P52815 198 aaKnown RBP7.58□□□□□ -1.2
LDB3-206ENST00000477489 NAPAP54920 295 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 NLRP12P59046 1061 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 ICA1Q05084 483 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 NONOQ15233 471 aaKnown RBP eCLIP7.58□□□□□ -1.2
LDB3-206ENST00000477489 CAMK4Q16566 473 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 ABCB5Q2M3G0 1257 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 KMT5BQ4FZB7 885 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 ANO6Q4KMQ2 910 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 BLOC1S3Q6QNY0 202 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 BTNL9Q6UXG8 535 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 SH3BP5LQ7L8J4 393 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 HEATR3Q7Z4Q2 680 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 ZSCAN29Q8IWY8 852 aaPredicted RBP7.58□□□□□ -1.2
LDB3-206ENST00000477489 CKAP2LQ8IYA6 745 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 CNNM3Q8NE01 707 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 SHISA4Q96DD7 197 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 PRMT6Q96LA8 375 aaPredicted RBP7.58□□□□□ -1.2
LDB3-206ENST00000477489 CUEDC2Q9H467 287 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 DNAJC18Q9H819 358 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 ARHGEF10LQ9HCE6 1279 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 KCNQ5Q9NR82 932 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 ZNF277Q9NRM2 450 aaPredicted RBP7.58□□□□□ -1.2
LDB3-206ENST00000477489 ZNF70Q9UC06 446 aaPredicted RBP7.58□□□□□ -1.2
LDB3-206ENST00000477489 CLIP2Q9UDT6 1046 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 PCDHA6Q9UN73 950 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 PCDHB6Q9Y5E3 794 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 PCDHA8Q9Y5H6 950 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 COL4A5P29400 1685 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 SMCO2A6NFE2 343 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 DDTLA6NHG4 134 aaPredicted RBP7.57□□□□□ -1.2
LDB3-206ENST00000477489 USP17L5A8MUK1 530 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 MPHOSPH10O00566 681 aaKnown RBP7.57□□□□□ -1.2
LDB3-206ENST00000477489 ACTN4O43707 911 aaKnown RBP7.57□□□□□ -1.2
LDB3-206ENST00000477489 SMC2O95347 1197 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 SLFN14P0C7P3 912 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 GCFC2P16383 781 aaKnown RBP7.57□□□□□ -1.2
LDB3-206ENST00000477489 CDC25BP30305 580 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 ADCY7P51828 1080 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 MLLT1Q03111 559 aaPredicted RBP7.57□□□□□ -1.2
LDB3-206ENST00000477489 CXCL9Q07325 125 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 AP3B2Q13367 1082 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 SLC4A8Q2Y0W8 1093 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 SLFN13Q68D06 897 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 USP17L2Q6R6M4 530 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 MOXD1Q6UVY6 613 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 PIK3AP1Q6ZUJ8 805 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 ZSCAN30Q86W11 494 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 REXO1Q8N1G1 1221 aaKnown RBP7.57□□□□□ -1.2
LDB3-206ENST00000477489 IQUBQ8NA54 791 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 RNF214Q8ND24 703 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 SPATA20Q8TB22 786 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 CSRNP1Q96S65 589 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 RAB34Q9BZG1 259 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 CCSER1Q9C0I3 900 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 TDRD3Q9H7E2 651 aaKnown RBP7.57□□□□□ -1.2
LDB3-206ENST00000477489 CBX8Q9HC52 389 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 RIC8AQ9NPQ8 531 aa7.57□□□□□ -1.2
LDB3-206ENST00000477489 BECN2A8MW95 431 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 FOSP01100 380 aaPredicted RBP7.56□□□□□ -1.2
LDB3-206ENST00000477489 ASNSP08243 561 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 EEF2P13639 858 aaKnown RBP7.56□□□□□ -1.2
LDB3-206ENST00000477489 SLC1A4P43007 532 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 EIF6P56537 245 aaKnown RBP7.56□□□□□ -1.2
LDB3-206ENST00000477489 IQCB1Q15051 598 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 SLC35G1Q2M3R5 365 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 PPP4R3AQ6IN85 833 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 DTHD1Q6ZMT9 781 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 NEK8Q86SG6 692 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 GPIHBP1Q8IV16 184 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 ZFPM1Q8IX07 1006 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 LRRC47Q8N1G4 583 aaKnown RBP7.56□□□□□ -1.2
LDB3-206ENST00000477489 KCTD17Q8N5Z5 321 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 MLKLQ8NB16 471 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 CUL5Q93034 780 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 MRFAP1L1Q96HT8 127 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 GSDMAQ96QA5 445 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 PIGSQ96S52 555 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 PRKD2Q9BZL6 878 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 CSRNP2Q9H175 543 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 JMJD4Q9H9V9 463 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
LDB3-206ENST00000477489 GOPCQ9HD26 462 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 TMX2Q9Y320 296 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 PPP2R3BQ9Y5P8 575 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 CNTNAP1P78357 1384 aa7.56□□□□□ -1.2
LDB3-206ENST00000477489 ATAD5Q96QE3 1844 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 hCG_1642624A0A1W2PR95 340 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 ESPNB1AK53 854 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 F5H6K3 240 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 FZD9O00144 591 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 NFKBIEO00221 500 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 RAD17O75943 681 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 ADCY5O95622 1261 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 GOLGA8HP0CJ92 632 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms