RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PCDHA1Q9Y5I3 950 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 ATF2P15336 505 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 ADAM9Q13443 819 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 LRRC24Q50LG9 513 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 RINT1Q6NUQ1 792 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 ZNF804BA4D1E1 1349 aa20.29■□□□□ 0.84
VARS2-209ENST00000477288 MYCP01106 439 aaPredicted RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 POLR2BP30876 1174 aaKnown RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 PNMA2Q9UL42 364 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 TYW5A2RUC4 315 aaKnown RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 SLC4A1P02730 911 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 GARSP41250 739 aaKnown RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 MYLK4Q86YV6 388 aaPredicted RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 TRIM58Q8NG06 486 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 SDCCAG3Q96C92 435 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 MX2P20592 715 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 IRX4P78413 519 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 PRPSAP1Q14558 356 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 PHLDB3Q6NSJ2 640 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 IPO11Q9UI26 975 aaKnown RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 RNF8O76064 485 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 LTKP29376 864 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 NLGN1Q8N2Q7 840 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 CFAP61Q8NHU2 1237 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 CSRNP1Q96S65 589 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 ANGPTL3Q9Y5C1 460 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 ZMYM4Q5VZL5 1548 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 TBC1D10BQ4KMP7 808 aaPredicted RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 RAPH1Q70E73 1250 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 MAGED2Q9UNF1 606 aaPredicted RBP20.28■□□□□ 0.84
VARS2-209ENST00000477288 HYOU1Q9Y4L1 999 aa20.28■□□□□ 0.84
VARS2-209ENST00000477288 A0A0D9SFI3 127 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 DDAH1O94760 285 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 SERPINB6P35237 376 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 RNASELQ05823 741 aaKnown RBP20.27■□□□□ 0.84
VARS2-209ENST00000477288 RSRC2Q7L4I2 434 aaKnown RBP20.27■□□□□ 0.84
VARS2-209ENST00000477288 ZNF274Q96GC6 653 aaPredicted RBP20.27■□□□□ 0.84
VARS2-209ENST00000477288 ZNF148Q9UQR1 794 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 PSPC1Q8WXF1 523 aaKnown RBP20.27■□□□□ 0.84
VARS2-209ENST00000477288 LRGUKQ96M69 825 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 ARHGEF5Q12774 1597 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 ADD1P35611 737 aaKnown RBP20.27■□□□□ 0.84
VARS2-209ENST00000477288 ARPP19P56211 112 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 GJA10Q969M2 543 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 HINFPQ9BQA5 517 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 GOLGA8CPA6NN73 597 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 RFX6Q8HWS3 928 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 OR8K1Q8NGG5 319 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 TSPYL2Q9H2G4 693 aaPredicted RBP20.27■□□□□ 0.84
VARS2-209ENST00000477288 MRPL46Q9H2W6 279 aaKnown RBP20.27■□□□□ 0.84
VARS2-209ENST00000477288 PCDHB4Q9Y5E5 795 aa20.27■□□□□ 0.84
VARS2-209ENST00000477288 PTPREP23469 700 aa20.27■□□□□ 0.83
VARS2-209ENST00000477288 YWHAGP61981 247 aaKnown RBP eCLIP20.27■□□□□ 0.83
VARS2-209ENST00000477288 NAA35Q5VZE5 725 aa20.27■□□□□ 0.83
VARS2-209ENST00000477288 METTL23Q86XA0 190 aa20.27■□□□□ 0.83
VARS2-209ENST00000477288 HOMER3Q9NSC5 361 aa20.27■□□□□ 0.83
VARS2-209ENST00000477288 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 NSFP46459 744 aaKnown RBP20.26■□□□□ 0.83
VARS2-209ENST00000477288 ADALQ6DHV7 355 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 XPOTO43592 962 aaKnown RBP20.26■□□□□ 0.83
VARS2-209ENST00000477288 CXorf38Q8TB03 319 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 PTPN22Q9Y2R2 807 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 MYL7Q01449 175 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 CDR2Q01850 454 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 SLC12A1Q13621 1099 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 ODR4Q5SWX8 454 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 LRCH2Q5VUJ6 765 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 HNRNPDLO14979 420 aaKnown RBP20.26■□□□□ 0.83
VARS2-209ENST00000477288 TRIM37O94972 964 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 CCDC51Q96ER9 411 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 ANKRD36BP1Q96IX9 119 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 IRAK4Q9NWZ3 460 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 CAPN7Q9Y6W3 813 aa20.26■□□□□ 0.83
VARS2-209ENST00000477288 RPN1P04843 607 aaKnown RBP20.25■□□□□ 0.83
VARS2-209ENST00000477288 HSPD1P10809 573 aaKnown RBP20.25■□□□□ 0.83
VARS2-209ENST00000477288 MKRN3Q13064 507 aaKnown RBP20.25■□□□□ 0.83
VARS2-209ENST00000477288 GALNT17Q6IS24 598 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 ZNF577Q9BSK1 485 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 PCCAP05165 728 aaPredicted RBP20.25■□□□□ 0.83
VARS2-209ENST00000477288 CRKLP46109 303 aaKnown RBP20.25■□□□□ 0.83
VARS2-209ENST00000477288 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 GREM2Q9H772 168 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 RIPOR2Q9Y4F9 1068 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 MED23Q9ULK4 1368 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.831e-7■■■□□ 15.5
VARS2-209ENST00000477288 LMNB1P20700 586 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 PTH1RQ03431 593 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 KIAA1024Q9UPX6 916 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 PPFIA2O75334 1257 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 KCTD1Q719H9 257 aa20.25■□□□□ 0.83
VARS2-209ENST00000477288 RETREG2Q8NC44 543 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 ABCF3Q9NUQ8 709 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 XDHP47989 1333 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 POC1B-GALNT4F8VUJ3 575 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 INO80B-WBP1J3KQ70 363 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 ATP6V1E2Q96A05 226 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 INO80BQ9C086 356 aaPredicted RBP20.24■□□□□ 0.83
VARS2-209ENST00000477288 SNX25Q9H3E2 840 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 TYW1Q9NV66 732 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms