RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PHOSPHO2Q8TCD6 241 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 CHURC1Q8WUH1 139 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 STAG1Q8WVM7 1258 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 ARNTL2Q8WYA1 636 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 OSBP2Q969R2 916 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 GMCL1Q96IK5 515 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 PURBQ96QR8 312 aaKnown RBP13.54□□□□□ -0.24
BRCA1-213ENST00000476777 ZNF287Q9HBT7 754 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 VTA1Q9NP79 307 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 CYP39A1Q9NYL5 469 aa13.54□□□□□ -0.24
BRCA1-213ENST00000476777 LCTP09848 1927 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 LPXNO60711 386 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 PLA2G6O60733 806 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 ACTN1P12814 892 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 PURAQ00577 322 aaKnown RBP13.53□□□□□ -0.24
BRCA1-213ENST00000476777 MUM1L1Q5H9M0 696 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 HERC6Q8IVU3 1022 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 ZBTB40Q9NUA8 1239 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 ISY1Q9ULR0 285 aaKnown RBP13.53□□□□□ -0.24
BRCA1-213ENST00000476777 PLIN4Q96Q06 1357 aa13.53□□□□□ -0.24
BRCA1-213ENST00000476777 TRIP12Q14669 1992 aaPredicted RBP13.52□□□□□ -0.24
BRCA1-213ENST00000476777 TSPY3P0CV98 308 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 TSPY8P0CW00 308 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 MCCP23508 829 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 RFC2P35250 354 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 SLC1A4P43007 532 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 TDO2P48775 406 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 SNAP25P60880 206 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 GRB10Q13322 594 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 APPBP2Q92624 585 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 CHMP4CQ96CF2 233 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 WDR11Q9BZH6 1224 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 POLR3EQ9NVU0 708 aa13.52□□□□□ -0.25
BRCA1-213ENST00000476777 FAM86C2PA6NEL3 165 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 GPAA1O43292 621 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 MYL3P08590 195 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 IQCF3P0C7M6 154 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 GNAT2P19087 354 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-213ENST00000476777 NBPF20Q3BBV1 942 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 NSMFQ6X4W1 530 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 KCTD1Q719H9 257 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 MTG1Q9BT17 334 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-213ENST00000476777 CD320Q9NPF0 282 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 PRR12Q9ULL5 1215 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 MYO7AQ13402 2215 aa13.51□□□□□ -0.25
BRCA1-213ENST00000476777 PI4K2BG5E9Z4 385 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 M0R2C6 588 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 RNF113AO15541 343 aaKnown RBP13.5□□□□□ -0.25
BRCA1-213ENST00000476777 APPP05067 770 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 CPT1AP50416 773 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 TFAP4Q01664 338 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 RCSD1Q6JBY9 416 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 PPP1R13LQ8WUF5 828 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 FTOQ9C0B1 505 aaKnown RBP eCLIP13.5□□□□□ -0.25
BRCA1-213ENST00000476777 CCPG1Q9ULG6 757 aa13.5□□□□□ -0.25
BRCA1-213ENST00000476777 RBM47A0AV96 593 aaKnown RBP13.49□□□□□ -0.25
BRCA1-213ENST00000476777 PATL2C9JE40 543 aaKnown RBP13.49□□□□□ -0.25
BRCA1-213ENST00000476777 SMARCA5O60264 1052 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-213ENST00000476777 BAIAP3O94812 1187 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-213ENST00000476777 PDE4BQ07343 736 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 BAATQ14032 418 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-213ENST00000476777 FAM47CQ5HY64 1035 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 RASGRP2Q7LDG7 609 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 IFNL3Q8IZI9 196 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 RETREG2Q8NC44 543 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-213ENST00000476777 ECHDC1Q9NTX5 307 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 LMCD1Q9NZU5 365 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 DDX19BQ9UMR2 479 aa13.49□□□□□ -0.25
BRCA1-213ENST00000476777 TANC1Q9C0D5 1861 aa13.48□□□□□ -0.25
BRCA1-213ENST00000476777 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
BRCA1-213ENST00000476777 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
BRCA1-213ENST00000476777 ICAM1P05362 532 aa13.48□□□□□ -0.25
BRCA1-213ENST00000476777 BFSP2Q13515 415 aa13.48□□□□□ -0.25
BRCA1-213ENST00000476777 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
BRCA1-213ENST00000476777 OR6J1Q8NGC5 347 aa13.48□□□□□ -0.25
BRCA1-213ENST00000476777 ADD3Q9UEY8 706 aaKnown RBP13.48□□□□□ -0.25
BRCA1-213ENST00000476777 PTPRSQ13332 1948 aa13.48□□□□□ -0.25
BRCA1-213ENST00000476777 A6NJR5 290 aa13.47□□□□□ -0.25
BRCA1-213ENST00000476777 NFIBO00712 420 aa13.47□□□□□ -0.25
BRCA1-213ENST00000476777 ZFYP08048 801 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-213ENST00000476777 MS4A1P11836 297 aa13.47□□□□□ -0.25
BRCA1-213ENST00000476777 PTPN11Q06124 597 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-213ENST00000476777 PPARAQ07869 468 aa13.47□□□□□ -0.25
BRCA1-213ENST00000476777 GPNMBQ14956 572 aa13.47□□□□□ -0.25
BRCA1-213ENST00000476777 BRDTQ58F21 947 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-213ENST00000476777 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
BRCA1-213ENST00000476777 TMCO2Q7Z6W1 182 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-213ENST00000476777 GDPD5Q8WTR4 605 aa13.47□□□□□ -0.25
BRCA1-213ENST00000476777 RANBP17Q9H2T7 1088 aaKnown RBP13.47□□□□□ -0.25
BRCA1-213ENST00000476777 IL17RBQ9NRM6 502 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms