RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TRDNQ13061 729 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 SHHQ15465 462 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
SEC13-214ENST00000476597 IFIT1BQ5T764 474 aaKnown RBP12.62□□□□□ -0.39
SEC13-214ENST00000476597 SLC30A10Q6XR72 485 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 FBXO16Q8IX29 292 aaPredicted RBP12.62□□□□□ -0.39
SEC13-214ENST00000476597 DNERQ8NFT8 737 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 MAP4K1Q92918 833 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 VTI1AQ96AJ9 217 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 AP5M1Q9H0R1 490 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 JMJD4Q9H9V9 463 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 PLXNA1Q9UIW2 1896 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 A0A0U1RQG5 324 aaPredicted RBP12.61□□□□□ -0.39
SEC13-214ENST00000476597 CABYRO75952 493 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 RAG1P15918 1043 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 PTGS1P23219 599 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 EDNRBP24530 442 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 FSCN1Q16658 493 aaKnown RBP12.61□□□□□ -0.39
SEC13-214ENST00000476597 USH1GQ495M9 461 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 DUSP28Q4G0W2 176 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 C9orf50Q5SZB4 431 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 TLK2Q86UE8 772 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 SLC43A3Q8NBI5 491 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 TBC1D5Q92609 795 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 WDR11Q9BZH6 1224 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 VAT1LQ9HCJ6 419 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 ABCB11O95342 1321 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 MROH7Q68CQ1 1323 aa12.61□□□□□ -0.39
SEC13-214ENST00000476597 COL6A3P12111 3177 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 E7EWF7 191 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 ZEB2O60315 1214 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 TIMP1P01033 207 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 FBXO11Q86XK2 927 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 DEFB123Q8N688 67 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 MPHOSPH6Q99547 160 aaKnown RBP12.6□□□□□ -0.39
SEC13-214ENST00000476597 MAD2L2Q9UI95 211 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 TBX21Q9UL17 535 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 TAF6LQ9Y6J9 622 aa12.6□□□□□ -0.39
SEC13-214ENST00000476597 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
SEC13-214ENST00000476597 B4DLN1 442 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 KLRF2D3W0D1 207 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 IFIT3O14879 490 aaKnown RBP12.59□□□□□ -0.39
SEC13-214ENST00000476597 MRPL12P52815 198 aaKnown RBP12.59□□□□□ -0.39
SEC13-214ENST00000476597 EPHB4P54760 987 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 PDE4DQ08499 809 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 FAM109BQ6ICB4 259 aaPredicted RBP12.59□□□□□ -0.39
SEC13-214ENST00000476597 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 Q7L0L9 218 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 MCF2L2Q86YR7 1114 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 FAM126BQ8IXS8 530 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 NCOA7Q8NI08 942 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 SYTL5Q8TDW5 730 aaPredicted RBP12.59□□□□□ -0.39
SEC13-214ENST00000476597 MTMR8Q96EF0 704 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 TAAR1Q96RJ0 339 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 SEZ6LQ9BYH1 1024 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 MRPL11Q9Y3B7 192 aaKnown RBP12.59□□□□□ -0.39
SEC13-214ENST00000476597 GRIN2DO15399 1336 aa12.59□□□□□ -0.39
SEC13-214ENST00000476597 DHX16O60231 1041 aaKnown RBP12.58□□□□□ -0.4
SEC13-214ENST00000476597 CD4P01730 458 aa12.58□□□□□ -0.4
SEC13-214ENST00000476597 FPGSQ05932 587 aa12.58□□□□□ -0.4
SEC13-214ENST00000476597 ITGA7Q13683 1181 aa12.58□□□□□ -0.4
SEC13-214ENST00000476597 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
SEC13-214ENST00000476597 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
SEC13-214ENST00000476597 AMNQ9BXJ7 453 aa12.58□□□□□ -0.4
SEC13-214ENST00000476597 SENP2Q9HC62 589 aa12.58□□□□□ -0.4
SEC13-214ENST00000476597 MTMR10Q9NXD2 777 aa12.58□□□□□ -0.4
SEC13-214ENST00000476597 ERICH2A1L162 156 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 ZBTB5O15062 677 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEC13-214ENST00000476597 TLR3O15455 904 aaKnown RBP12.57□□□□□ -0.4
SEC13-214ENST00000476597 TROAPQ12815 778 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 GRM4Q14833 912 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 WTAPQ15007 396 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 SLC35G1Q2M3R5 365 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 IGDCC4Q8TDY8 1250 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 NSUN6Q8TEA1 469 aaKnown RBP12.57□□□□□ -0.4
SEC13-214ENST00000476597 SCFD2Q8WU76 684 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 IWS1Q96ST2 819 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 RIOX1Q9H6W3 641 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 POLR3EQ9NVU0 708 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 COL20A1Q9P218 1284 aa12.57□□□□□ -0.4
SEC13-214ENST00000476597 RBM8AQ9Y5S9 174 aaKnown RBP12.57□□□□□ -0.4
SEC13-214ENST00000476597 A6NJR5 290 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 OPLAHO14841 1288 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 PPP1R11O60927 126 aaPredicted RBP12.56□□□□□ -0.4
SEC13-214ENST00000476597 TXNP10599 105 aaKnown RBP12.56□□□□□ -0.4
SEC13-214ENST00000476597 CPT1AP50416 773 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 ANTXR2P58335 489 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 PSMC6P62333 389 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 GHRHRQ02643 423 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 TTLL4Q14679 1199 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 SART3Q15020 963 aaKnown RBP12.56□□□□□ -0.4
SEC13-214ENST00000476597 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 C16orf59Q7L2K0 433 aa12.56□□□□□ -0.4
SEC13-214ENST00000476597 MB21D2Q8IYB1 491 aaPredicted RBP12.56□□□□□ -0.4
SEC13-214ENST00000476597 OR6J1Q8NGC5 347 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms