RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 NFS1Q9Y697 457 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 SPEF2Q9C093 1822 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 KIF4AO95239 1232 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 DDX58O95786 925 aaKnown RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 NQO1P15559 274 aaKnown RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 ATP2A2P16615 1042 aaKnown RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 CASKIN2Q8WXE0 1202 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 WASF1Q92558 559 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 PHKBQ93100 1093 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 NAF1Q96HR8 494 aaKnown RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 TTYH3Q9C0H2 523 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 CWC25Q9NXE8 425 aaPredicted RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 LRWD1Q9UFC0 647 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 PDS5AQ29RF7 1337 aaKnown RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 GPR75-ASB3A0A0A6YYF3 556 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 VIMP08670 466 aaKnown RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 MRPS35P82673 323 aaKnown RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 ZBED6P86452 979 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 ZNF844Q08AG5 666 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 ERMARDQ5T6L9 678 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 RRAGBQ5VZM2 374 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 NCAPG2Q86XI2 1143 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 RBM12BQ8IXT5 1001 aaKnown RBP15.26■□□□□ 0.03
HDAC1-206ENST00000476391 ASB3Q9Y575 518 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 EID1Q9Y6B2 187 aa15.26■□□□□ 0.03
HDAC1-206ENST00000476391 AFF2P51816 1311 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 ESYT3A0FGR9 886 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 DPPA5A6NC42 116 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 BTBD18B2RXH4 712 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 PDLIM1O00151 329 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 MMP1P03956 469 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 PARP1P09874 1014 aaKnown RBP15.25■□□□□ 0.03
HDAC1-206ENST00000476391 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
HDAC1-206ENST00000476391 CXCR5P32302 372 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 HSD17B3P37058 310 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 DNM2P50570 870 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 CYP27A1Q02318 531 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
HDAC1-206ENST00000476391 LBRQ14739 615 aaKnown RBP15.25■□□□□ 0.03
HDAC1-206ENST00000476391 NTRK3Q16288 839 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 ARMC3Q5W041 872 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 DTNBP1Q96EV8 351 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 BICD1Q96G01 975 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 SMARCAL1Q9NZC9 954 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 CNOT8Q9UFF9 292 aaKnown RBP15.25■□□□□ 0.03
HDAC1-206ENST00000476391 ACEP12821 1306 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 RFX5P48382 616 aaPredicted RBP15.25■□□□□ 0.03
HDAC1-206ENST00000476391 HAND2P61296 217 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 CUL3Q13618 768 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 SGSM1Q2NKQ1 1148 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 PIGWQ7Z7B1 504 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 TEKT4Q8WW24 435 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 NELFBQ8WX92 580 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 CCDC42Q96M95 316 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 PCDHB6Q9Y5E3 794 aa15.25■□□□□ 0.03
HDAC1-206ENST00000476391 A0A087X0B3 334 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 GRID2IPA4D2P6 1211 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 ZSCAN5CA6NGD5 496 aaPredicted RBP15.24■□□□□ 0.03
HDAC1-206ENST00000476391 M0R2C6 588 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 CASP1P29466 404 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 CTNNA1P35221 906 aaKnown RBP15.24■□□□□ 0.03
HDAC1-206ENST00000476391 TAF11Q15544 211 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 LRRC23Q53EV4 343 aaPredicted RBP15.24■□□□□ 0.03
HDAC1-206ENST00000476391 HHATQ5VTY9 493 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 TRPM8Q7Z2W7 1104 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 DIS3L2Q8IYB7 885 aaKnown RBP15.24■□□□□ 0.03
HDAC1-206ENST00000476391 ATL2Q8NHH9 583 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 RBM41Q96IZ5 413 aaKnown RBP15.24■□□□□ 0.03
HDAC1-206ENST00000476391 IFIH1Q9BYX4 1025 aaKnown RBP15.24■□□□□ 0.03
HDAC1-206ENST00000476391 FAM129AQ9BZQ8 928 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 EHD2Q9NZN4 543 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 NWD1Q149M9 1564 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 ZNF263O14978 683 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 MOCS3O95396 460 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 TRIM21P19474 475 aaKnown RBP15.24■□□□□ 0.03
HDAC1-206ENST00000476391 RANBP1P43487 201 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 ZNF131P52739 623 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 MXRA7P84157 204 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 CMPK2Q5EBM0 449 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 APOA5Q6Q788 366 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 XPO6Q96QU8 1125 aaKnown RBP15.24■□□□□ 0.03
HDAC1-206ENST00000476391 ISCUQ9H1K1 167 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 AGPAT5Q9NUQ2 364 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 WDR35Q9P2L0 1181 aa15.24■□□□□ 0.03
HDAC1-206ENST00000476391 TOPAZ1Q8N9V7 1692 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 PLEKHG3A1L390 1219 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 BACH1O14867 736 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 EVI5O60447 810 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 FGAP02671 866 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 SRGNP10124 158 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 ALDH3A1P30838 453 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 ALDH5A1P51649 535 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-206ENST00000476391 MTMR3Q13615 1198 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 ANKRD23Q86SG2 305 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 ZNF317Q96PQ6 595 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-206ENST00000476391 FAM167BQ9BTA0 163 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 TLR10Q9BXR5 811 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 PCDHA13Q9Y5I0 950 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 PTPRUQ92729 1446 aa15.23■□□□□ 0.03
HDAC1-206ENST00000476391 RANBP6O60518 1105 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms