RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 COBLO75128 1261 aa25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 PGK2P07205 417 aa25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 FLT3LGP49771 235 aa25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 HSD17B4P51659 736 aa25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 PRMT2P55345 433 aa25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 SAMD3Q8N6K7 520 aa25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 CCDC12Q8WUD4 166 aaPredicted RBP25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 ALG1Q9BT22 464 aa25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.52■■□□□ 1.68
MCF2L2-209ENST00000475664 CFBP00751 764 aa25.51■■□□□ 1.67
MCF2L2-209ENST00000475664 HOXC6P09630 235 aa25.51■■□□□ 1.67
MCF2L2-209ENST00000475664 RGS2P41220 211 aa25.51■■□□□ 1.67
MCF2L2-209ENST00000475664 FAM177A1Q8N128 213 aaPredicted RBP25.51■■□□□ 1.67
MCF2L2-209ENST00000475664 FAM133AQ8N9E0 248 aa25.51■■□□□ 1.67
MCF2L2-209ENST00000475664 CCDC148Q8NFR7 591 aa25.51■■□□□ 1.67
MCF2L2-209ENST00000475664 PSTPIP2Q9H939 334 aa25.51■■□□□ 1.67
MCF2L2-209ENST00000475664 MAP3K20Q9NYL2 800 aaKnown RBP25.51■■□□□ 1.67
MCF2L2-209ENST00000475664 SMCO2A6NFE2 343 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 GCOM1H8Y6P7 765 aaPredicted RBP25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 POLR2MP0CAP2 368 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 CALML3P27482 149 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 IRF5Q13568 498 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 ZNF792Q3KQV3 632 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 CTU1Q7Z7A3 348 aaKnown RBP25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 SYTL5Q8TDW5 730 aaPredicted RBP25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 INTS4Q96HW7 963 aaKnown RBP25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 APBA2Q99767 749 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 ZMYND12Q9H0C1 365 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 RIC8AQ9NPQ8 531 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 COL20A1Q9P218 1284 aa25.5■■□□□ 1.67
MCF2L2-209ENST00000475664 POTEB2H3BUK9 544 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 PIK3CDO00329 1044 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 MEIS2O14770 477 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 ADCY7P51828 1080 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 CNTN2Q02246 1040 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 DPP9Q86TI2 863 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 TEX2Q8IWB9 1127 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 NPLOC4Q8TAT6 608 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 CUL5Q93034 780 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 FGD4Q96M96 766 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 SMC3Q9UQE7 1217 aa25.49■■□□□ 1.67
MCF2L2-209ENST00000475664 XRCC5P13010 732 aaKnown RBP25.48■■□□□ 1.67
MCF2L2-209ENST00000475664 CYP2B6P20813 491 aa25.48■■□□□ 1.67
MCF2L2-209ENST00000475664 HOXA13P31271 388 aaPredicted RBP25.48■■□□□ 1.67
MCF2L2-209ENST00000475664 USP17L6PQ6QN14 398 aa25.48■■□□□ 1.67
MCF2L2-209ENST00000475664 PURBQ96QR8 312 aaKnown RBP25.48■■□□□ 1.67
MCF2L2-209ENST00000475664 GJB4Q9NTQ9 266 aa25.48■■□□□ 1.67
MCF2L2-209ENST00000475664 SLC5A4Q9NY91 659 aa25.48■■□□□ 1.67
MCF2L2-209ENST00000475664 DIS3Q9Y2L1 958 aaKnown RBP25.48■■□□□ 1.67
MCF2L2-209ENST00000475664 ASTN1O14525 1302 aa25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 SOWAHBA6NEL2 793 aa25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 XBP1P17861 261 aa25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 GJB2P29033 226 aa25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 MRPL12P52815 198 aaKnown RBP25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 FAM184AQ8NB25 1140 aa25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 GLT8D2Q9H1C3 349 aa25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 C6orf50Q9HD87 102 aa25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 PTPN22Q9Y2R2 807 aa25.47■■□□□ 1.67
MCF2L2-209ENST00000475664 NLRP5P59047 1200 aa25.46■■□□□ 1.67
MCF2L2-209ENST00000475664 NPY5RQ15761 445 aa25.46■■□□□ 1.67
MCF2L2-209ENST00000475664 UBE2SQ16763 222 aa25.46■■□□□ 1.67
MCF2L2-209ENST00000475664 MAML3Q96JK9 1138 aa25.46■■□□□ 1.67
MCF2L2-209ENST00000475664 PHF20Q9BVI0 1012 aa25.46■■□□□ 1.67
MCF2L2-209ENST00000475664 KCNJ14Q9UNX9 436 aa25.46■■□□□ 1.67
MCF2L2-209ENST00000475664 PTCH2Q9Y6C5 1203 aa25.46■■□□□ 1.67
MCF2L2-209ENST00000475664 LRRC37A2A6NM11 1700 aa25.46■■□□□ 1.67
MCF2L2-209ENST00000475664 ADAMTS3O15072 1205 aa25.45■■□□□ 1.66
MCF2L2-209ENST00000475664 GNA11P29992 359 aa25.45■■□□□ 1.66
MCF2L2-209ENST00000475664 ZNF467Q7Z7K2 595 aaPredicted RBP25.45■■□□□ 1.66
MCF2L2-209ENST00000475664 DAGLBQ8NCG7 672 aa25.45■■□□□ 1.66
MCF2L2-209ENST00000475664 RAET1EQ8TD07 263 aa25.45■■□□□ 1.66
MCF2L2-209ENST00000475664 KIF3AQ9Y496 699 aa25.45■■□□□ 1.66
MCF2L2-209ENST00000475664 MCM3APO60318 1980 aa25.45■■□□□ 1.66
MCF2L2-209ENST00000475664 IGHA2P01877 340 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 CLK2P49760 499 aaKnown RBP25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 FOSBP53539 338 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 BECN1Q14457 450 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 CCL14Q16627 93 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 GALNT17Q6IS24 598 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 DNERQ8NFT8 737 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 C8orf76Q96K31 380 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 TAAR1Q96RJ0 339 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 FLRT1Q9NZU1 646 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 ADD3Q9UEY8 706 aaKnown RBP25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 PCDHA4Q9UN74 947 aa25.44■■□□□ 1.66
MCF2L2-209ENST00000475664 ALDH5A1P51649 535 aaPredicted RBP25.43■■□□□ 1.66
MCF2L2-209ENST00000475664 OLFML2BQ68BL8 750 aa25.43■■□□□ 1.66
MCF2L2-209ENST00000475664 KRT40Q6A162 431 aa25.43■■□□□ 1.66
MCF2L2-209ENST00000475664 FCHSD1Q86WN1 690 aa25.43■■□□□ 1.66
MCF2L2-209ENST00000475664 REXO1Q8N1G1 1221 aaKnown RBP25.43■■□□□ 1.66
MCF2L2-209ENST00000475664 BICD2Q8TD16 824 aa25.43■■□□□ 1.66
MCF2L2-209ENST00000475664 FOXD4L1Q9NU39 408 aa25.43■■□□□ 1.66
MCF2L2-209ENST00000475664 FRMPD4Q14CM0 1322 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 ADCY3O60266 1144 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 TRIM29Q14134 588 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 PKN2Q16513 984 aaKnown RBP25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 MAMDC4Q6UXC1 1216 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 TRMT44Q8IYL2 757 aaKnown RBP25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 BLIDQ8IZY5 108 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 PXYLP1Q8TE99 480 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms