RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 BMP6P22004 513 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 ILDR2Q71H61 639 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 SRPRBQ9Y5M8 271 aaKnown RBP12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 NEMFO60524 1076 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 HS1BP3Q53T59 392 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 FAM151AQ8WW52 585 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 TNFRSF25Q93038 417 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 SMARCE1Q969G3 411 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 WNK4Q96J92 1243 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 P2RX7Q99572 595 aaKnown RBP12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 GDAQ9Y2T3 454 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 ZHX2Q9Y6X8 837 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 FLOT1O75955 427 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 UBASH3AP57075 661 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 TNIP1Q15025 636 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 ATL3Q6DD88 541 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 ZBTB5O15062 677 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 PPP6R2O75170 966 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 GNA11P29992 359 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 HMGCS2P54868 508 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 NAA30Q147X3 362 aaPredicted RBP12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 PPP2R5BQ15173 497 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 WDR78Q5VTH9 848 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 NSMFQ6X4W1 530 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 NEK8Q86SG6 692 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
KCNIP3-206ENST00000475491 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 RBM43Q6ZSC3 357 aaKnown RBP12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 CCDC17Q96LX7 622 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 SAMSN1Q9NSI8 373 aaKnown RBP12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 MYH6P13533 1939 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 PNMA6FA0A0J9YX94 578 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 NLRP12P59046 1061 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 SYDE2Q5VT97 1194 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 TPM4P67936 248 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 FANCCQ00597 558 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 GRM1Q13255 1194 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 CALCRLQ16602 461 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 MYRIPQ8NFW9 859 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 KIAA1524Q8TCG1 905 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 LRRC15Q8TF66 581 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 ARHGEF10LQ9HCE6 1279 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 CALCOCO1Q9P1Z2 691 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 NFE2L3Q9Y4A8 694 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 ROBO3Q96MS0 1386 aa12.86□□□□□ -0.35
KCNIP3-206ENST00000475491 RRAGBQ5VZM2 374 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 PLA2G4DQ86XP0 818 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 SPZ1Q9BXG8 430 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 CLGNO14967 610 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 TNNT1P13805 278 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 LRRC41Q15345 812 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 PAGE5Q96GU1 130 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 BCAS3Q9H6U6 928 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 TRIM49BA6NDI0 452 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 STAT2P52630 851 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 C9orf131Q5VYM1 1079 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 CUL5Q93034 780 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 MTA3Q9BTC8 594 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 RIOX1Q9H6W3 641 aa12.85□□□□□ -0.35
KCNIP3-206ENST00000475491 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 NPHP3-ACAD11A0A0J9YXS1 232 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 POTEIP0CG38 1075 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 POTEJP0CG39 1038 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 PLCG1P19174 1290 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 CAP2P40123 477 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 ADKP55263 362 aaKnown RBP12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 NOC3LQ8WTT2 800 aaKnown RBP12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 ZMYND12Q9H0C1 365 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 CTNND2Q9UQB3 1225 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 ENTPD3O75355 529 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 FAM193AP78312 1265 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 ATP2C1P98194 919 aaPredicted RBP12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 LRRC8AQ8IWT6 810 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 MTRQ99707 1265 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 DDX25Q9UHL0 483 aaKnown RBP12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 SPDYE3A6NKU9 549 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 MYCLP12524 364 aaPredicted RBP12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 MCM6Q14566 821 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 TATDN1Q6P1N9 297 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 LRWD1Q9UFC0 647 aa12.84□□□□□ -0.35
KCNIP3-206ENST00000475491 HPSEQ9Y251 543 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms