RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 MOXD2PA6NHM9 499 aa18.15■□□□□ 0.5
CPSF3-203ENST00000475482 HSP90AA1P07900 732 aaKnown RBP18.15■□□□□ 0.5
CPSF3-203ENST00000475482 TRIM60Q495X7 471 aa18.15■□□□□ 0.5
CPSF3-203ENST00000475482 TAPT1Q6NXT6 567 aa18.15■□□□□ 0.5
CPSF3-203ENST00000475482 STOX1Q6ZVD7 989 aa18.15■□□□□ 0.5
CPSF3-203ENST00000475482 FERMT2Q96AC1 680 aa18.15■□□□□ 0.5
CPSF3-203ENST00000475482 PURBQ96QR8 312 aaKnown RBP18.15■□□□□ 0.5
CPSF3-203ENST00000475482 UPF3BQ9BZI7 483 aaKnown RBP18.15■□□□□ 0.5
CPSF3-203ENST00000475482 PDRG1Q9NUG6 133 aa18.15■□□□□ 0.5
CPSF3-203ENST00000475482 GNEQ9Y223 722 aaKnown RBP18.15■□□□□ 0.5
CPSF3-203ENST00000475482 A0A1W2PQ45 241 aaPredicted RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 A0A1W2PQY0 241 aa18.14■□□□□ 0.49
CPSF3-203ENST00000475482 E7EWF7 191 aa18.14■□□□□ 0.49
CPSF3-203ENST00000475482 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 ACLYP53396 1101 aa18.14■□□□□ 0.49
CPSF3-203ENST00000475482 KCNA10Q16322 511 aa18.14■□□□□ 0.49
CPSF3-203ENST00000475482 ADCK5Q3MIX3 580 aa18.14■□□□□ 0.49
CPSF3-203ENST00000475482 IFIT1BQ5T764 474 aaKnown RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 RALYLQ86SE5 291 aaKnown RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 ADGRF4Q8IZF3 695 aa18.14■□□□□ 0.49
CPSF3-203ENST00000475482 ALDH8A1Q9H2A2 487 aaPredicted RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 ADD3Q9UEY8 706 aaKnown RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 DDX49Q9Y6V7 483 aaKnown RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 BAZ2BQ9UIF8 2168 aaKnown RBP18.14■□□□□ 0.49
CPSF3-203ENST00000475482 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.13■□□□□ 0.49
CPSF3-203ENST00000475482 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 ALDH5A1P51649 535 aaPredicted RBP18.13■□□□□ 0.49
CPSF3-203ENST00000475482 RPS6P62753 249 aaKnown RBP18.13■□□□□ 0.49
CPSF3-203ENST00000475482 IRX5P78411 483 aaPredicted RBP18.13■□□□□ 0.49
CPSF3-203ENST00000475482 CDC37Q16543 378 aaPredicted RBP18.13■□□□□ 0.49
CPSF3-203ENST00000475482 IQSEC1Q6DN90 963 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 SLC30A10Q6XR72 485 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 RNF207Q6ZRF8 634 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 NCOA7Q8NI08 942 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 MTMR8Q96EF0 704 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 JMJD4Q9H9V9 463 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 VTA1Q9NP79 307 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 PCDH10Q9P2E7 1040 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 ATP11BQ9Y2G3 1177 aa18.13■□□□□ 0.49
CPSF3-203ENST00000475482 PALM3A6NDB9 673 aaPredicted RBP18.12■□□□□ 0.49
CPSF3-203ENST00000475482 SMPD1P17405 629 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 EDNRBP24530 442 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 TNFAIP2Q03169 654 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 TLE2Q04725 743 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 DHX32Q7L7V1 743 aaKnown RBP18.12■□□□□ 0.49
CPSF3-203ENST00000475482 ANKRD33Q7Z3H0 272 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 MB21D2Q8IYB1 491 aaPredicted RBP18.12■□□□□ 0.49
CPSF3-203ENST00000475482 STAG2Q8N3U4 1231 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 PCSK9Q8NBP7 692 aaKnown RBP18.12■□□□□ 0.49
CPSF3-203ENST00000475482 DNERQ8NFT8 737 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 ZSCAN31Q96LW9 406 aaPredicted RBP18.12■□□□□ 0.49
CPSF3-203ENST00000475482 TOX2Q96NM4 488 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 PDLIM7Q9NR12 457 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 PDGFCQ9NRA1 345 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 MAD2L2Q9UI95 211 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 Q9Y3F1 56 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 ELP1O95163 1332 aa18.12■□□□□ 0.49
CPSF3-203ENST00000475482 RBM47A0AV96 593 aaKnown RBP18.11■□□□□ 0.49
CPSF3-203ENST00000475482 PTPDC1A2A3K4 754 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 C6orf222P0C671 652 aaPredicted RBP18.11■□□□□ 0.49
CPSF3-203ENST00000475482 ANTXR2P58335 489 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 FGD1P98174 961 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 QRICH1Q2TAL8 776 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 LRIT3Q3SXY7 679 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 TDHQ8IZJ6 230 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 IGDCC4Q8TDY8 1250 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 NUP133Q8WUM0 1156 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 SPC25Q9HBM1 224 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 SENP2Q9HC62 589 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 LIMCH1Q9UPQ0 1083 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 ABCB11O95342 1321 aa18.11■□□□□ 0.49
CPSF3-203ENST00000475482 SOX1O00570 391 aaPredicted RBP18.1■□□□□ 0.49
CPSF3-203ENST00000475482 ASGR1P07306 291 aa18.1■□□□□ 0.49
CPSF3-203ENST00000475482 CDK7P50613 346 aa18.1■□□□□ 0.49
CPSF3-203ENST00000475482 MDM2Q00987 491 aaPredicted RBP18.1■□□□□ 0.49
CPSF3-203ENST00000475482 GHRHRQ02643 423 aa18.1■□□□□ 0.49
CPSF3-203ENST00000475482 TROAPQ12815 778 aa18.1■□□□□ 0.49
CPSF3-203ENST00000475482 SLC35G1Q2M3R5 365 aa18.1■□□□□ 0.49
CPSF3-203ENST00000475482 SH3RF1Q7Z6J0 888 aa18.1■□□□□ 0.49
CPSF3-203ENST00000475482 FBXO16Q8IX29 292 aaPredicted RBP18.1■□□□□ 0.49
CPSF3-203ENST00000475482 MTA3Q9BTC8 594 aa18.1■□□□□ 0.49
CPSF3-203ENST00000475482 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
CPSF3-203ENST00000475482 STARD7Q9NQZ5 370 aa18.1■□□□□ 0.49
CPSF3-203ENST00000475482 TRIM43BA6NCK2 446 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 IFIT3O14879 490 aaKnown RBP18.09■□□□□ 0.49
CPSF3-203ENST00000475482 CD2BP2O95400 341 aaKnown RBP18.09■□□□□ 0.49
CPSF3-203ENST00000475482 CALML3P27482 149 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 MCM5P33992 734 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 AK2P54819 239 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 GRM4Q14833 912 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 USH1GQ495M9 461 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 DUSP28Q4G0W2 176 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 GNASQ5JWF2 1037 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 TMEM63BQ5T3F8 832 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 TLK2Q86UE8 772 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 TBC1D5Q92609 795 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 TRIM43Q96BQ3 446 aaPredicted RBP18.09■□□□□ 0.49
CPSF3-203ENST00000475482 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms