RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 BEX3Q00994 111 aa13.36□□□□□ -0.27
GPM6B-208ENST00000475307 TMEM67Q5HYA8 995 aa13.36□□□□□ -0.27
GPM6B-208ENST00000475307 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
GPM6B-208ENST00000475307 SH3RF1Q7Z6J0 888 aa13.36□□□□□ -0.27
GPM6B-208ENST00000475307 TLK2Q86UE8 772 aa13.36□□□□□ -0.27
GPM6B-208ENST00000475307 RGS22Q8NE09 1264 aa13.36□□□□□ -0.27
GPM6B-208ENST00000475307 LSG1Q9H089 658 aaKnown RBP13.36□□□□□ -0.27
GPM6B-208ENST00000475307 PDLIM7Q9NR12 457 aa13.36□□□□□ -0.27
GPM6B-208ENST00000475307 GNEQ9Y223 722 aaKnown RBP13.36□□□□□ -0.27
GPM6B-208ENST00000475307 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
GPM6B-208ENST00000475307 ELP1O95163 1332 aa13.36□□□□□ -0.27
GPM6B-208ENST00000475307 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
GPM6B-208ENST00000475307 DCDC2CA8MYV0 355 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 SOX1O00570 391 aaPredicted RBP13.35□□□□□ -0.27
GPM6B-208ENST00000475307 ZEB2O60315 1214 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 GRM4Q14833 912 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 FSCN1Q16658 493 aaKnown RBP13.35□□□□□ -0.27
GPM6B-208ENST00000475307 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 MB21D2Q8IYB1 491 aaPredicted RBP13.35□□□□□ -0.27
GPM6B-208ENST00000475307 DNERQ8NFT8 737 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 BADQ92934 168 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 SENP2Q9HC62 589 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 Q9Y3F1 56 aa13.35□□□□□ -0.27
GPM6B-208ENST00000475307 A0A0U1RQG5 324 aaPredicted RBP13.34□□□□□ -0.27
GPM6B-208ENST00000475307 TRIM43BA6NCK2 446 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 CTAGE5O15320 804 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 RAG1P15918 1043 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 PTGS1P23219 599 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 ANTXR2P58335 489 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 NKX3-2P78367 333 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 DUSP28Q4G0W2 176 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 TMEM63BQ5T3F8 832 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 ANKRD33Q7Z3H0 272 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 CATIPQ7Z7H3 387 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 HOMER1Q86YM7 354 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 SYTL5Q8TDW5 730 aaPredicted RBP13.34□□□□□ -0.27
GPM6B-208ENST00000475307 TBC1D5Q92609 795 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 TRIM43Q96BQ3 446 aaPredicted RBP13.34□□□□□ -0.27
GPM6B-208ENST00000475307 LRCH3Q96II8 777 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 TOX2Q96NM4 488 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 WDR11Q9BZH6 1224 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 MAF1Q9H063 256 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 MROH7Q68CQ1 1323 aa13.34□□□□□ -0.27
GPM6B-208ENST00000475307 ARVCFO00192 962 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 SLC27A2O14975 620 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 ZBTB5O15062 677 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 CABYRO75952 493 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 FAAP100Q0VG06 881 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 CREB3L3Q68CJ9 461 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 IGDCC4Q8TDY8 1250 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 NSUN6Q8TEA1 469 aaKnown RBP13.33□□□□□ -0.28
GPM6B-208ENST00000475307 TAAR1Q96RJ0 339 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 SMCHD1A6NHR9 2005 aa13.33□□□□□ -0.28
GPM6B-208ENST00000475307 RBM47A0AV96 593 aaKnown RBP13.32□□□□□ -0.28
GPM6B-208ENST00000475307 KIAA0355O15063 1070 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 TLR3O15455 904 aaKnown RBP13.32□□□□□ -0.28
GPM6B-208ENST00000475307 PRC1O43663 620 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 CFBP00751 764 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 EDNRBP24530 442 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 MCM5P33992 734 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 CDK7P50613 346 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 TROAPQ12815 778 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 TRAF1Q13077 416 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 NECTIN1Q15223 517 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 NFXL1Q6ZNB6 911 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 OR6J1Q8NGC5 347 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 MTMR8Q96EF0 704 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 PIGSQ96S52 555 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 PCDHA1Q9Y5I3 950 aa13.32□□□□□ -0.28
GPM6B-208ENST00000475307 LRRC37A2A6NM11 1700 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 PPP1R11O60927 126 aaPredicted RBP13.31□□□□□ -0.28
GPM6B-208ENST00000475307 CDC45O75419 566 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 ITGB8P26012 769 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 CPT1AP50416 773 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 TTLL4Q14679 1199 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 ARHGEF16Q5VV41 709 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 ZNF654Q8IZM8 581 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 CTCFLQ8NI51 663 aaPredicted RBP13.31□□□□□ -0.28
GPM6B-208ENST00000475307 RMDN3Q96TC7 470 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 RIOX1Q9H6W3 641 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 LY9Q9HBG7 655 aa13.31□□□□□ -0.28
GPM6B-208ENST00000475307 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
GPM6B-208ENST00000475307 CCDC69A6NI79 296 aa13.3□□□□□ -0.28
GPM6B-208ENST00000475307 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.28
GPM6B-208ENST00000475307 DDAH1O94760 285 aa13.3□□□□□ -0.28
GPM6B-208ENST00000475307 MYL3P08590 195 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms