RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 CERS4Q9HA82 394 aa18.89■□□□□ 0.61
ITGB1-211ENST00000475184 COG5Q9UP83 839 aa18.89■□□□□ 0.61
ITGB1-211ENST00000475184 EPOPA6NHQ4 379 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 M0R2C6 588 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 RNF113AO15541 343 aaKnown RBP18.88■□□□□ 0.61
ITGB1-211ENST00000475184 PLA2G6O60733 806 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 ACTN1P12814 892 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 MCCP23508 829 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 PDE4BQ07343 736 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 DUSP28Q4G0W2 176 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 MORC4Q8TE76 937 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 SLC9A7Q96T83 725 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 POLR3EQ9NVU0 708 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 HCN4Q9Y3Q4 1203 aa18.88■□□□□ 0.61
ITGB1-211ENST00000475184 ZFYP08048 801 aaPredicted RBP18.87■□□□□ 0.61
ITGB1-211ENST00000475184 SNAP25P60880 206 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 PURAQ00577 322 aaKnown RBP18.87■□□□□ 0.61
ITGB1-211ENST00000475184 TFAP4Q01664 338 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 KRT40Q6A162 431 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 NSMFQ6X4W1 530 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 KCTD1Q719H9 257 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 IFNL3Q8IZI9 196 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 PURBQ96QR8 312 aaKnown RBP18.87■□□□□ 0.61
ITGB1-211ENST00000475184 LRFN3Q9BTN0 628 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 EPHX3Q9H6B9 360 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 CCPG1Q9ULG6 757 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 PRR12Q9ULL5 1215 aa18.87■□□□□ 0.61
ITGB1-211ENST00000475184 ARIH1Q9Y4X5 557 aaPredicted RBP18.87■□□□□ 0.61
ITGB1-211ENST00000475184 PATL2C9JE40 543 aaKnown RBP18.86■□□□□ 0.61
ITGB1-211ENST00000475184 SLC3A2P08195 630 aaKnown RBP18.86■□□□□ 0.61
ITGB1-211ENST00000475184 RFC2P35250 354 aa18.86■□□□□ 0.61
ITGB1-211ENST00000475184 CPT1AP50416 773 aa18.86■□□□□ 0.61
ITGB1-211ENST00000475184 TAP1Q03518 808 aa18.86■□□□□ 0.61
ITGB1-211ENST00000475184 PHOSPHO2Q8TCD6 241 aa18.86■□□□□ 0.61
ITGB1-211ENST00000475184 ARNTL2Q8WYA1 636 aa18.86■□□□□ 0.61
ITGB1-211ENST00000475184 WDR11Q9BZH6 1224 aa18.86■□□□□ 0.61
ITGB1-211ENST00000475184 NACAP1Q9BZK3 213 aa18.86■□□□□ 0.61
ITGB1-211ENST00000475184 CHMP4BQ9H444 224 aaKnown RBP18.86■□□□□ 0.61
ITGB1-211ENST00000475184 TLL1O43897 1013 aa18.85■□□□□ 0.61
ITGB1-211ENST00000475184 MYL3P08590 195 aa18.85■□□□□ 0.61
ITGB1-211ENST00000475184 PPP4R3BQ5MIZ7 849 aa18.85■□□□□ 0.61
ITGB1-211ENST00000475184 RCSD1Q6JBY9 416 aa18.85■□□□□ 0.61
ITGB1-211ENST00000475184 GPATCH3Q96I76 525 aa18.85■□□□□ 0.61
ITGB1-211ENST00000475184 MTG1Q9BT17 334 aaPredicted RBP18.85■□□□□ 0.61
ITGB1-211ENST00000475184 ADD3Q9UEY8 706 aaKnown RBP18.85■□□□□ 0.61
ITGB1-211ENST00000475184 STX8Q9UNK0 236 aa18.85■□□□□ 0.61
ITGB1-211ENST00000475184 PITPNM1O00562 1244 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 ARHGEF15O94989 841 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 ALDH5A1P51649 535 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-211ENST00000475184 PPARAQ07869 468 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 FAM47CQ5HY64 1035 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 TMEM31Q5JXX7 168 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 TSHZ3Q63HK5 1081 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 RASGRP2Q7LDG7 609 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 HERC6Q8IVU3 1022 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 HLA-CQ95604 372 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 NAPBQ9H115 298 aa18.84■□□□□ 0.61
ITGB1-211ENST00000475184 GPHNQ9NQX3 736 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-211ENST00000475184 KIF28PB7ZC32 967 aa18.83■□□□□ 0.6
ITGB1-211ENST00000475184 ICAM1P05362 532 aa18.83■□□□□ 0.6
ITGB1-211ENST00000475184 BAATQ14032 418 aaPredicted RBP18.83■□□□□ 0.6
ITGB1-211ENST00000475184 NBPF20Q3BBV1 942 aa18.83■□□□□ 0.6
ITGB1-211ENST00000475184 OR6J1Q8NGC5 347 aa18.83■□□□□ 0.6
ITGB1-211ENST00000475184 FTOQ9C0B1 505 aaKnown RBP eCLIP18.83■□□□□ 0.6
ITGB1-211ENST00000475184 SIP14410 1827 aa18.83■□□□□ 0.6
ITGB1-211ENST00000475184 RAD50Q92878 1312 aa18.82■□□□□ 0.6
ITGB1-211ENST00000475184 LOC102724159A0A0B4J2E5 919 aa18.82■□□□□ 0.6
ITGB1-211ENST00000475184 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
ITGB1-211ENST00000475184 IQCF3P0C7M6 154 aa18.82■□□□□ 0.6
ITGB1-211ENST00000475184 GRB10Q13322 594 aa18.82■□□□□ 0.6
ITGB1-211ENST00000475184 PWP2Q15269 919 aaKnown RBP18.82■□□□□ 0.6
ITGB1-211ENST00000475184 LRRFIP1Q32MZ4 808 aaKnown RBP18.82■□□□□ 0.6
ITGB1-211ENST00000475184 BRDTQ58F21 947 aaPredicted RBP18.82■□□□□ 0.6
ITGB1-211ENST00000475184 NFRKBQ6P4R8 1299 aa18.82■□□□□ 0.6
ITGB1-211ENST00000475184 RETREG2Q8NC44 543 aa18.82■□□□□ 0.6
ITGB1-211ENST00000475184 KIAA1217Q5T5P2 1943 aa18.81■□□□□ 0.6
ITGB1-211ENST00000475184 TSPY2A6NKD2 308 aa18.81■□□□□ 0.6
ITGB1-211ENST00000475184 NFIBO00712 420 aa18.81■□□□□ 0.6
ITGB1-211ENST00000475184 NMT2O60551 498 aa18.81■□□□□ 0.6
ITGB1-211ENST00000475184 CCDC96Q2M329 555 aa18.81■□□□□ 0.6
ITGB1-211ENST00000475184 PPP1R13LQ8WUF5 828 aa18.81■□□□□ 0.6
ITGB1-211ENST00000475184 SEC62Q99442 399 aaKnown RBP18.81■□□□□ 0.6
ITGB1-211ENST00000475184 RANBP17Q9H2T7 1088 aaKnown RBP18.81■□□□□ 0.6
ITGB1-211ENST00000475184 IL17RBQ9NRM6 502 aa18.81■□□□□ 0.6
ITGB1-211ENST00000475184 MTMR7Q9Y216 660 aa18.81■□□□□ 0.6
ITGB1-211ENST00000475184 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
ITGB1-211ENST00000475184 LPXNO60711 386 aa18.8■□□□□ 0.6
ITGB1-211ENST00000475184 BAIAP3O94812 1187 aa18.8■□□□□ 0.6
ITGB1-211ENST00000475184 BFSP2Q13515 415 aa18.8■□□□□ 0.6
ITGB1-211ENST00000475184 PPP2R5BQ15173 497 aa18.8■□□□□ 0.6
ITGB1-211ENST00000475184 SPRED2Q7Z698 418 aa18.8■□□□□ 0.6
ITGB1-211ENST00000475184 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.8■□□□□ 0.6
ITGB1-211ENST00000475184 NKRFO15226 690 aaKnown RBP eCLIP18.79■□□□□ 0.6
ITGB1-211ENST00000475184 KPNA6O60684 536 aa18.79■□□□□ 0.6
ITGB1-211ENST00000475184 KCNJ6P48051 423 aa18.79■□□□□ 0.6
ITGB1-211ENST00000475184 PTPN11Q06124 597 aaPredicted RBP18.79■□□□□ 0.6
ITGB1-211ENST00000475184 SLC30A10Q6XR72 485 aa18.79■□□□□ 0.6
ITGB1-211ENST00000475184 DCAF4Q8WV16 495 aa18.79■□□□□ 0.6
ITGB1-211ENST00000475184 KHSRPQ92945 711 aaKnown RBP eCLIP18.79■□□□□ 0.64e-6■■□□□ 14.1
ITGB1-211ENST00000475184 C11orf16Q9NQ32 467 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms